RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DMRTC1Q5HYR2 192 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 CASC10Q5T4H9 136 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF658Q5TYW1 1059 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 METAP1DQ6UB28 335 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 IL34Q6ZMJ4 242 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 FAM228AQ86W67 206 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 ECHDC2Q86YB7 292 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 PIANPQ8IYJ0 282 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 C11orf42Q8N5U0 333 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 CD177Q8N6Q3 437 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 DNAJA4Q8WW22 397 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR1E3Q8WZA6 343 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 UFD1Q92890 307 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 NEIL2Q969S2 332 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 RASD2Q96D21 266 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 PAGE5Q96GU1 130 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 SEC22AQ96IW7 307 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 SMIM14Q96QK8 99 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 GAL3ST1Q99999 423 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 GPR61Q9BZJ8 451 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 PKIBQ9C010 78 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 NMUR2Q9GZQ4 415 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZDHHC11Q9H8X9 412 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 FOLH1BQ9HBA9 442 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 NMRAL1Q9HBL8 299 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 ETNK2Q9NVF9 386 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 KIF25Q9UIL4 384 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 RPL36Q9Y3U8 105 aaKnown RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 MMP24Q9Y5R2 645 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 RGPD8O14715 1765 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 IFT172Q9UG01 1749 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 IGHV3OR16-13A0A075B7E8 117 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 IGKV3D-20A0A0C4DH25 116 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 BTBD17A6NE02 478 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 LOC110117498-PIK3R3F6TDL0 507 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 POLR2DO15514 142 aaKnown RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 TBL1XO60907 577 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 C1orf105O95561 183 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 TMEM50AO95807 157 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 RBMY1CP0DJD4 496 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NCF2P19878 526 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 RPS12P25398 132 aaKnown RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 HTR1FP30939 366 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NTSP30990 170 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 GDI1P31150 447 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 YAP1P46937 504 aaKnown RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 TAF6P49848 677 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 KLK7P49862 253 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 P2RY4P51582 365 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 DIO3P55073 304 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 PLP1P60201 277 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF45Q02386 682 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 GPNMBQ14956 572 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 ARL6IP1Q15041 203 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 OXA1LQ15070 435 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLC1A5Q15758 541 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 SSX2Q16385 188 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 KCTD21Q4G0X4 260 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 BCL7AQ4VC05 210 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR52E8Q6IFG1 317 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 FBXL22Q6P050 247 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 RFLNAQ6ZTI6 216 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 PGAP1Q75T13 922 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 FAM220AQ7Z4H9 259 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF589Q86UQ0 364 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 P2RY8Q86VZ1 359 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NBPF5PQ86XG9 351 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 TGIF2LXQ8IUE1 241 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 PSTKQ8IV42 348 aaKnown RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NRMQ8IXM6 262 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 UBE2J2Q8N2K1 259 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 MTURNQ8N3F0 131 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCDC71LQ8N9Z2 235 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 SDR9C7Q8NEX9 313 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 BBS1Q8NFJ9 593 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 BRSK1Q8TDC3 778 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 TM4SF19Q96DZ7 209 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NUS1Q96E22 293 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CNOT6LQ96LI5 555 aaKnown RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CLCC1Q96S66 551 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CNN2Q99439 309 aaKnown RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 ARHGDIGQ99819 225 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NARFLQ9H6Q4 476 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NT5MQ9NPB1 228 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 MARCH5Q9NX47 278 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 SPATA7Q9P0W8 599 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 ABCD2Q9UBJ2 740 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CLEC4EQ9ULY5 219 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 STAP1Q9ULZ2 295 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 COPS3Q9UNS2 423 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 UGT2A1Q9Y4X1 527 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 NEUROG3Q9Y4Z2 214 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CSDC2Q9Y534 153 aaKnown RBP2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CUL9Q8IWT3 2517 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 PPLO60437 1756 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 KIF24Q5T7B8 1368 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 CARMIL3Q8ND23 1372 aa2.23□□□□□ -2.05
HMGB1P27-201ENST00000431429 C4BP0C0L5 1744 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 CRYBG1Q9Y4K1 1723 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 PIK3C2AO00443 1686 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms