RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TRDV1A0A1B0GX56 115 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 SHISA3A0PJX4 238 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 TVP23AA6NH52 213 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 FTCDNL1E5RQL4 147 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 G3V3Y1 287 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 PLPP3O14495 311 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 MAGEB3O15480 346 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 OR2T7P0C7T2 308 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 TFPIP10646 304 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 APOBEC1P41238 236 aaKnown RBP15.04■□□□□ -0
USHBP1-203ENST00000431146 IFITM3Q01628 133 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 C19orf57Q0VDD7 668 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 MELKQ14680 651 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 PLPPR5Q32ZL2 321 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 SLC35D3Q5M8T2 416 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 TMEM91Q6ZNR0 172 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 PLEKHG7Q6ZR37 379 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 PPP1R32Q7Z5V6 425 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 SCAIQ8N9R8 606 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 WDSUB1Q8N9V3 476 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 OR2T27Q8NH04 317 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 POC1BQ8TC44 478 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 ASB15Q8WXK1 588 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 FOXN4Q96NZ1 517 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 A3GALT2U3KPV4 340 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 OTOGLQ3ZCN5 2332 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 DXOO77932 396 aaKnown RBP15.03■□□□□ -0
USHBP1-203ENST00000431146 OR6A2O95222 327 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 DLGAP3O95886 979 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 HLA-DPB1P04440 258 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 FGF9P31371 208 aaPredicted RBP15.03■□□□□ -0
USHBP1-203ENST00000431146 RPS27P42677 84 aaKnown RBP15.03■□□□□ -0
USHBP1-203ENST00000431146 BDH1Q02338 343 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 OR2M3Q8NG83 312 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 FNDC8Q8TC99 324 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 SNX33Q8WV41 574 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 SLC25A46Q96AG3 418 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 ITPKCQ96DU7 683 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 SDHAF3Q9NRP4 125 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 FAIMQ9NVQ4 179 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 ANKRD10Q9NXR5 420 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 GNG8Q9UK08 70 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 GSTK1Q9Y2Q3 226 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 NOX1Q9Y5S8 564 aa15.03■□□□□ -0
USHBP1-203ENST00000431146 PRR32B1ATL7 298 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 RGS5O15539 181 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 NCR1O76036 304 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 MT-CO3P00414 261 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 IL1AP01583 271 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 CCL3P10147 92 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 SLC25A1P53007 311 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 Q0VFX4 171 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 ATP1A4Q13733 1029 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 EMC4Q5J8M3 183 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 CDCP2Q5VXM1 449 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 GPR139Q6DWJ6 353 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 GPALPP1Q8IXQ4 340 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 SUMF1Q8NBK3 374 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 NDEL1Q9GZM8 345 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 SMURF1Q9HCE7 757 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 ACOXLQ9NUZ1 547 aa15.02■□□□□ -0
USHBP1-203ENST00000431146 DOCK10Q96BY6 2186 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 XKRYO14609 159 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 TP53I11O14683 189 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 OR2T1O43869 369 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 RENP00797 406 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 RPL27P61353 136 aaKnown RBP15.02□□□□□ -0.01
USHBP1-203ENST00000431146 IL10RAQ13651 578 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 ZNF468Q5VIY5 522 aaPredicted RBP15.02□□□□□ -0.01
USHBP1-203ENST00000431146 RPS19BP1Q86WX3 136 aaKnown RBP15.02□□□□□ -0.01
USHBP1-203ENST00000431146 NEIL3Q8TAT5 605 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 PELI1Q96FA3 418 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 LIN37Q96GY3 246 aaPredicted RBP15.02□□□□□ -0.01
USHBP1-203ENST00000431146 ZPBPQ9BS86 351 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 NCDNQ9UBB6 729 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 FARSAQ9Y285 508 aaKnown RBP15.02□□□□□ -0.01
USHBP1-203ENST00000431146 KLHDC2Q9Y2U9 406 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 PCDHGB7Q9Y5F8 929 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 PCDHGB6Q9Y5F9 930 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 PEX16Q9Y5Y5 336 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 ASPMQ8IZT6 3477 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 FREM3P0C091 2139 aa15.02□□□□□ -0.01
USHBP1-203ENST00000431146 IGLV3-32A0A0A0MS00 114 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 CASKO14936 926 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 F8A1P23610 371 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 MSX1P28360 303 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 PSMB10P40306 273 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 SSR4P51571 173 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 RUNX1T1Q06455 604 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 FAM27D1Q5T7N8 215 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 OPN5Q6U736 354 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 TMEM156Q8N614 296 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 OR4K17Q8NGC6 315 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 OR13C5Q8NGS8 318 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 DDIT4LQ96D03 193 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 DDA1Q9BW61 102 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 SPRY4Q9C004 299 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 PPIL3Q9H2H8 161 aaKnown RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 WDR76Q9H967 626 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms