RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 HPDLQ96IR7 371 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 CNTNAP3BQ96NU0 1288 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PNMA5Q96PV4 448 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 RAB40CQ96S21 281 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF350Q9GZX5 532 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TWSG1Q9GZX9 223 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF586Q9NXT0 402 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF346Q9UL40 294 aaKnown RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ASF1AQ9Y294 204 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ARHGEF40Q8TER5 1519 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 C9orf84Q5VXU9 1444 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TMEM265A0A087WTH1 108 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 A0A087X0T9 212 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 C9J4A7 227 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TRAPPC2LH3BP13 241 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PDXKO00764 312 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 FCN3O75636 299 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HAND1O96004 215 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HPP00738 406 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HPRP00739 348 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TSPAN19P0C672 248 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SELEP16581 610 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HTR2AP28223 471 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PTPN7P35236 360 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TAS2R38P59533 333 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 RAP1BP61224 184 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ERVS71-1P61550 626 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 KLRC3Q07444 240 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ECH1Q13011 328 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HIST2H2ACQ16777 129 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 FAM98CQ17RN3 349 aaKnown RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TMEM128Q5BJH2 165 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 Q6ZVU0 165 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 WDR53Q7Z5U6 358 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 GALNT10Q86SR1 603 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 LYG1Q8N1E2 194 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TMEM156Q8N614 296 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 CLDN22Q8N7P3 220 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR52L2PQ8NGH6 319 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR52I1Q8NGK6 324 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 RXFP2Q8WXD0 754 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 BTN2A3PQ96KV6 586 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ANGPTL4Q9BY76 406 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HRASLSQ9HDD0 168 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 CUTCQ9NTM9 273 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 CLN6Q9NWW5 311 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 CLEC1BQ9P126 229 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SEMA5BQ9P283 1151 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 DNMT3BQ9UBC3 853 aaKnown RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TCF19Q9Y242 345 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TEX14Q8IWB6 1497 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 MYH6P13533 1939 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PRDM15P57071 1507 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TMEM2Q9UHN6 1383 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 TRAV19A0A0A6YYK7 116 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 FAM187AA6NFU0 413 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 SDHDO14521 159 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 TMPRSS2O15393 492 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 CSN2P05814 226 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 DBHP09172 617 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 H2AFZP0C0S5 128 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 SNRPBP14678 240 aaKnown RBP4.92□□□□□ -1.62
PTPN4-203ENST00000430976 ST6GAL1P15907 406 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 GLRXP35754 106 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 GMPRP36959 345 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 GLRBP48167 497 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 LGALS4P56470 323 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF266Q14584 549 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 LRRC26Q2I0M4 334 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 CTSL3PQ5NE16 218 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 SDHAF4Q5VUM1 108 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 GLYATQ6IB77 296 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 CDHR3Q6ZTQ4 885 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 H2AFVQ71UI9 128 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF572Q7Z3I7 529 aaPredicted RBP4.92□□□□□ -1.62
PTPN4-203ENST00000430976 MARCH1Q8TCQ1 289 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 PRMT6Q96LA8 375 aaPredicted RBP4.92□□□□□ -1.62
PTPN4-203ENST00000430976 MUS81Q96NY9 551 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 METTL17Q9H7H0 456 aaPredicted RBP4.92□□□□□ -1.62
PTPN4-203ENST00000430976 APMAPQ9HDC9 416 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 NECAP2Q9NVZ3 263 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 SH2B3Q9UQQ2 575 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 FGD6Q6ZV73 1430 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 MAGEB17A8MXT2 336 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 F5H6K3 240 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 ACTL6AO96019 429 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 AZU1P20160 251 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 HNRNPA3P51991 378 aaKnown RBP4.92□□□□□ -1.62
PTPN4-203ENST00000430976 CRISP1P54107 249 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 DUOXA1Q1HG43 343 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 PYDC2Q56P42 97 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 LYRM7Q5U5X0 104 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 GDF6Q6KF10 455 aaPredicted RBP4.92□□□□□ -1.62
PTPN4-203ENST00000430976 HIST2H3AQ71DI3 136 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 C17orf78Q8N4C9 275 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 FEZF2Q8TBJ5 459 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 NETO1Q8TDF5 533 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 ATG4AQ8WYN0 398 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 FKBP10Q96AY3 582 aa4.92□□□□□ -1.62
PTPN4-203ENST00000430976 ALG14Q96F25 216 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms