RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 MAOBP27338 520 aa15.34■□□□□ 0.05
RIF1-204ENST00000430328 RBPJQ06330 500 aa15.34■□□□□ 0.05
RIF1-204ENST00000430328 RGNQ15493 299 aa15.34■□□□□ 0.05
RIF1-204ENST00000430328 KIAA1456Q9P272 454 aa15.34■□□□□ 0.05
RIF1-204ENST00000430328 SLC43A1O75387 559 aa15.34■□□□□ 0.05
RIF1-204ENST00000430328 L3MBTL4Q8NA19 623 aa15.34■□□□□ 0.05
RIF1-204ENST00000430328 NUP205Q92621 2012 aa15.33■□□□□ 0.05
RIF1-204ENST00000430328 ETV3P41162 512 aa15.33■□□□□ 0.05
RIF1-204ENST00000430328 ACKR1Q16570 336 aa15.33■□□□□ 0.05
RIF1-204ENST00000430328 COMMD6Q7Z4G1 85 aa15.33■□□□□ 0.05
RIF1-204ENST00000430328 H1FXQ92522 213 aaKnown RBP15.33■□□□□ 0.05
RIF1-204ENST00000430328 DNMT3BQ9UBC3 853 aaKnown RBP15.33■□□□□ 0.05
RIF1-204ENST00000430328 GPRIN2O60269 458 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 SLC25A11Q02978 314 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 LYSMD1Q96S90 227 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 ZFYVE21Q9BQ24 234 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 BCO1Q9HAY6 547 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 LRRC3CA6NJW4 275 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 RNASEK-C17orf49H0YIS7 233 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 FBP1P09467 338 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 APEX1P27695 318 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 EMX1Q04741 257 aaPredicted RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 EXOSC2Q13868 293 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 OR7E24Q6IFN5 339 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 LRRC56Q8IYG6 542 aaPredicted RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 CMTM3Q96MX0 182 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 ZNF768Q9H5H4 540 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 STRAPQ9Y3F4 350 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 SYT6Q5T7P8 510 aaPredicted RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 LAX1Q8IWV1 398 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 TCTEX1D1Q8N7M0 179 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 BAZ2AQ9UIF9 1905 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 KIF1AQ12756 1690 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 NKX6-3A6NJ46 265 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 UBL3O95164 117 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 DCTP40126 519 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 GNB1P62873 340 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 Q6ZVL8 140 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 NAGSQ8N159 534 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 FAM3CQ92520 227 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 DYRK2Q92630 601 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 SPO11Q9Y5K1 396 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 LRRC30A6NM36 301 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 S100A4P26447 101 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 ERVFC1-1P60608 527 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 OXA1LQ15070 435 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 PRSS35Q8N3Z0 413 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 TAS2R5Q9NYW4 299 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 OR1A1Q9P1Q5 309 aa15.33■□□□□ 0.04
RIF1-204ENST00000430328 GMPR2Q9P2T1 348 aaKnown RBP15.33■□□□□ 0.04
RIF1-204ENST00000430328 M0R143 59 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 NAGAP17050 411 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 FGF7P21781 194 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 PPP1CBP62140 327 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 RETREG3Q86VR2 466 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 RPUSD4Q96CM3 377 aaKnown RBP15.32■□□□□ 0.04
RIF1-204ENST00000430328 ULBP2Q9BZM5 246 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 TCRBP04435 133 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 SRMP19623 302 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 NCR3LG1Q68D85 454 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 OR4F15Q8NGB8 312 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 BCO2Q9BYV7 579 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 MN1Q10571 1320 aaPredicted RBP15.32■□□□□ 0.04
RIF1-204ENST00000430328 ABOP16442 354 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 BPIFB3P59826 476 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 DTD1Q8TEA8 209 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 BARHL1Q9BZE3 327 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 ATXN1LP0C7T5 689 aaKnown RBP15.32■□□□□ 0.04
RIF1-204ENST00000430328 CD80P33681 288 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 C21orf62-AS1Q17RA5 79 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 FFAR4Q5NUL3 377 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 ZNF468Q5VIY5 522 aaPredicted RBP15.32■□□□□ 0.04
RIF1-204ENST00000430328 SMIM7Q9BQ49 75 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 NRIP3Q9NQ35 241 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 DCAF13Q9NV06 445 aaKnown RBP15.32■□□□□ 0.04
RIF1-204ENST00000430328 WNT6Q9Y6F9 365 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 FGFBP2Q9BYJ0 223 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 EVA1AQ9H8M9 152 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 CDC34P49427 236 aaPredicted RBP15.32■□□□□ 0.04
RIF1-204ENST00000430328 TEKQ02763 1124 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 TOMM20LQ6UXN7 152 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 OR13C8Q8NGS7 320 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 HLA-CQ95604 372 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 SUSD3Q96L08 255 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 SLC6A18Q96N87 628 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 NOX4Q9NPH5 578 aa15.32■□□□□ 0.04
RIF1-204ENST00000430328 A0A1B0GVG6 124 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 CLDN24A6NM45 220 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 NLRC3Q7RTR2 1065 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 GPR26Q8NDV2 337 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 LGALS14Q8TCE9 139 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 ZNF300Q96RE9 604 aaPredicted RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 CRLF2Q9HC73 371 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 LEFTY1O75610 366 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 CST2P09228 141 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 DACT2Q5SW24 774 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 CD276Q5ZPR3 534 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 HBMQ6B0K9 141 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 OR5AR1Q8NGP9 310 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms