RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 PRR14Q9BWN1 585 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 OPA3Q9H6K4 179 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 WDR76Q9H967 626 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 LUZP4Q9P127 313 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 PIGLQ9Y2B2 252 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 ALOX12BO75342 701 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 OR10J4P0C629 311 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 MMP12P39900 470 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 GPR85P60893 370 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 PLA2G7Q13093 441 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 OR6V1Q8N148 313 aa14.24□□□□□ -0.13
PTPRF-206ENST00000429895 EMG1Q92979 244 aaKnown RBP14.24□□□□□ -0.13
PTPRF-206ENST00000429895 OR5K3A6NET4 321 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 FADS1O60427 444 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 KCNK2O95069 426 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 TACR1P25103 407 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 IL3RAP26951 378 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 TNFSF8P32971 234 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 REEP5Q00765 189 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 MBOAT2Q6ZWT7 520 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 OR2T27Q8NH04 317 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 UTP4Q969X6 686 aaKnown RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 GINS3Q9BRX5 216 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 TCEAL2Q9H3H9 227 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 C1orf123Q9NWV4 160 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 GLTPQ9NZD2 209 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 OSGIN1Q9UJX0 560 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 TMEM82A0PJX8 343 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 BCL6P41182 706 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 RIPPLY1Q0D2K3 151 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 CCDC71Q8IV32 467 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 CMIPQ8IY22 773 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 PARP16Q8N5Y8 322 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 OR2T11Q8NH01 316 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 IFI44Q8TCB0 444 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 TOX2Q96NM4 488 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 DCLRE1CQ96SD1 692 aaKnown RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 EPHX3Q9H6B9 360 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 CPNE5Q9HCH3 593 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 MEIOCA2RUB1 952 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 PRAMEF25A6NGN4 478 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 SHISA7A6NL88 538 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 PHF1O43189 567 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 GDPD3Q7L5L3 318 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 RNF113BQ8IZP6 322 aaKnown RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 FRMD1Q8N878 549 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 LGALS14Q8TCE9 139 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 RASD2Q96D21 266 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 RAB40ALP0C0E4 278 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 DHRS4L1P0CG22 281 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF728P0DKX0 622 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 CDK4P11802 303 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 RAB11AP62491 216 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 LILRA3Q8N6C8 439 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF439Q8NDP4 499 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 RAB40AQ8WXH6 277 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 DVL3Q92997 716 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 INTS12Q96CB8 462 aaKnown RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 HDAC8Q9BY41 377 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 TAS2R16Q9NYV7 291 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 FBXL2Q9UKC9 423 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 TLCD2A6NGC4 264 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 CRYM-AS1A6NIL9 109 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 AKR7A3O95154 331 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 CLINT1Q14677 625 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF74Q16587 644 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 COX20Q5RI15 118 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 C6orf15Q6UXA7 325 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF534Q76KX8 674 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 FAM213BQ8TBF2 198 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 PDXPQ96GD0 296 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 OBP2AQ9NY56 170 aa14.23□□□□□ -0.13
PTPRF-206ENST00000429895 NSA2O95478 260 aaKnown RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 SPCS2Q15005 226 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ADAMTSL4Q6UY14 1074 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 BCDIN3DQ7Z5W3 292 aaKnown RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 YRDCQ86U90 279 aaKnown RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 SUMF1Q8NBK3 374 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ABHD4Q8TB40 342 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 CCDC74AQ96AQ1 378 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF486Q96H40 463 aaPredicted RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 BOD1Q96IK1 185 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ERVMER34-1Q9H9K5 563 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 A0A1B0GWA3 101 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ADPRMQ3LIE5 342 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 KDM8Q8N371 416 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 NRG4Q8WWG1 115 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 HPSE2Q8WWQ2 592 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 TM4SF18Q96CE8 201 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 SLC46A1Q96NT5 459 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ZBP1Q9H171 429 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 CXorf36Q9H7Y0 433 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 MOKQ9UQ07 419 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 A0A1W2PPH5 198 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 RPS10-NUDT3A0A1W2PQS6 291 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 UBBP0CG47 229 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 UBCP0CG48 685 aaKnown RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 RPS10P46783 165 aaKnown RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 GIPRP48546 466 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 UBE2KP61086 200 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms