RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SNX32Q86XE0 403 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 UEVLDQ8IX04 471 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 NFKBIDQ8NI38 313 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 HPS1Q92902 700 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 ZBTB9Q96C00 473 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 TLCD1Q96CP7 247 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 SLC47A1Q96FL8 570 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 LRR1Q96L50 414 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 DOK1Q99704 481 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 ASPNQ9BXN1 380 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 NOX3Q9HBY0 568 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 DYNLRB1Q9NP97 96 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 B3GAT2Q9NPZ5 323 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 TCF7L2Q9NQB0 619 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 A0A087WUJ7 227 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 TGDSO95455 350 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 RGS8P57771 180 aaPredicted RBP12.88□□□□□ -0.35
MSH5-208ENST00000429846 CDK6Q00534 326 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 SNTB2Q13425 540 aaKnown RBP12.88□□□□□ -0.35
MSH5-208ENST00000429846 GSG1Q2KHT4 349 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 BLOC1S3Q6QNY0 202 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 ZNF627Q7L945 461 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 MDP1Q86V88 176 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 C20orf196Q8IYI0 205 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 SVOPLQ8N434 492 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 CKAP2Q8WWK9 683 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 ZNF837Q96EG3 531 aaPredicted RBP12.88□□□□□ -0.35
MSH5-208ENST00000429846 C7orf26Q96N11 449 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 ZNF607Q96SK3 696 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 DENND2DQ9H6A0 471 aaPredicted RBP12.88□□□□□ -0.35
MSH5-208ENST00000429846 TMEM38AQ9H6F2 299 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 TMEM27Q9HBJ8 222 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 SLC25A37Q9NYZ2 338 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 NOX1Q9Y5S8 564 aa12.88□□□□□ -0.35
MSH5-208ENST00000429846 A0A0B4J2E0 115 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 A0A1B0GX12 115 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 ZNF503-AS2A6NEH8 195 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 M0R3G1 203 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 ZNF500O60304 480 aaPredicted RBP12.87□□□□□ -0.35
MSH5-208ENST00000429846 NR4A1P22736 598 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 EVX1P49640 407 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 PUDPQ08623 228 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 IL17RELQ6ZVW7 336 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 RANBP3LQ86VV4 465 aaPredicted RBP12.87□□□□□ -0.35
MSH5-208ENST00000429846 MSRB3Q8IXL7 192 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 TMEM43Q9BTV4 400 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 C19orf24Q9BVV8 132 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 VAPAQ9P0L0 249 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 SLC13A4Q9UKG4 626 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 FBXL3Q9UKT7 428 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 SPEF1Q9Y4P9 236 aa12.87□□□□□ -0.35
MSH5-208ENST00000429846 TRBV5-3A0A0A0MS03 114 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 TMEM129A0AVI4 362 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 MS4A18H0YCH9 400 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 LILRA1O75019 489 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 SERPINB7O75635 380 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 SEC14L2O76054 403 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 BGLAPP02818 100 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 C8BP07358 591 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 GPX2P18283 190 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 SLC6A2P23975 617 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 RPS23P62266 143 aaKnown RBP12.86□□□□□ -0.35
MSH5-208ENST00000429846 RIN1Q13671 783 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 SCARB2Q14108 478 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 ADRM1Q16186 407 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 CR1LQ2VPA4 569 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 MS4A18Q3C1V0 323 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 LIPNQ5VXI9 398 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 KRT80Q6KB66 452 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 ZNF813Q6ZN06 617 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 PXKQ7Z7A4 578 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 COMTD1Q86VU5 262 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 FUNDC1Q8IVP5 155 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 RNF217Q8TC41 542 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 UBASH3BQ8TF42 649 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 MRPL24Q96A35 216 aaKnown RBP12.86□□□□□ -0.35
MSH5-208ENST00000429846 SOX7Q9BT81 388 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 RSPO3Q9BXY4 272 aaPredicted RBP12.86□□□□□ -0.35
MSH5-208ENST00000429846 ULBP2Q9BZM5 246 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 TMBIM4Q9HC24 238 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 MRPL39Q9NYK5 338 aaKnown RBP12.86□□□□□ -0.35
MSH5-208ENST00000429846 CCDC167Q9P0B6 97 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 ANGPT4Q9Y264 503 aa12.86□□□□□ -0.35
MSH5-208ENST00000429846 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 EVPLLA8MZ36 301 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 M0R233 179 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 SYNGR3O43761 229 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 TPST1O60507 370 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 FMO6PO60774 539 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 ENTPD5O75356 428 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 ERLIN1O75477 346 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 HPRP00739 348 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 MT-ATP6P00846 226 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 HLA-HP01893 362 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 CD79AP11912 226 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms