RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GGHQ92820 318 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 GSTP1P09211 210 aaKnown RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SUMO1P63165 101 aaKnown RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 DEFB119Q8N690 84 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 KCNE4Q8WWG9 221 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 JAM3Q9BX67 310 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 NKX6-2Q9C056 277 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 COL2A1P02458 1487 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 MEIS3P1A6NDR6 274 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 FCGR2AP12318 317 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SOX18P35713 384 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 RPE65Q16518 533 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SUMF1Q8NBK3 374 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 OR8U1Q8NH10 309 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 OR52N1Q8NH53 320 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 APH1BQ8WW43 257 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 MOCOSQ96EN8 888 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 HSFX1Q9UBD0 423 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 MRPS28Q9Y2Q9 187 aaKnown RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 NUP205Q92621 2012 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 NSG1A0A0A6YYJ2 146 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 STK11Q15831 433 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 PRICKLE2Q7Z3G6 844 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 OR52R1Q8NGF1 315 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 OR10J5Q8NHC4 309 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SECTM1Q8WVN6 248 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 NOX4Q9NPH5 578 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 DIMT1Q9UNQ2 313 aaKnown RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SNED1Q8TER0 1413 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF732B4DXR9 585 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 CHEK1O14757 476 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 DDOSTP39656 456 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 PSMB10P40306 273 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 ALKAL2Q6UX46 152 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF765Q7L2R6 523 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 NPFFR2Q9Y5X5 522 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 FAM72CH0Y354 149 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 LGALS8O00214 317 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 NUPL2O15504 423 aaKnown RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 AQP9O43315 295 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 FBXO45P0C2W1 286 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 PAX6P26367 422 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 BMI1P35226 326 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF93P35789 620 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 WNT7BP56706 349 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 HTR4Q13639 388 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 FAM72AQ5TYM5 149 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 FAM72DQ6L9T8 149 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 CDHR3Q6ZTQ4 885 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 FAM72BQ86X60 149 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SLC35E1Q96K37 410 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 EGLN1Q9GZT9 426 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 COQ3Q9NZJ6 369 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 GPR171O14626 319 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 FOXD2O60548 495 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SLC1A3P43003 542 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 NEIL2Q969S2 332 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 IL37Q9NZH6 218 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 OSGIN1Q9UJX0 560 aa13.41□□□□□ -0.26
PTPN13-203ENST00000427191 ADRB1P08588 477 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 TGM1P22735 817 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 SNRPGP62308 76 aaKnown RBP13.4□□□□□ -0.26
PTPN13-203ENST00000427191 DUSP6Q16828 381 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 OR1M1Q8NGA1 313 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 ALG12Q9BV10 488 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 TXLNGYQ9BZA5 131 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 POFUT1Q9H488 388 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 MN1Q10571 1320 aaPredicted RBP13.4□□□□□ -0.26
PTPN13-203ENST00000427191 TRAV27A0A087WT01 109 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 CRYM-AS1A6NIL9 109 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 RPS23P62266 143 aaKnown RBP13.4□□□□□ -0.26
PTPN13-203ENST00000427191 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 TRIB1Q96RU8 372 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 DHRS4Q9BTZ2 278 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 ARNT2Q9HBZ2 717 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 GJB5O95377 273 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 RAF1P04049 648 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 SORT1Q99523 831 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 ZCWPW2A0A1B0GU75 182 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 PHF1O43189 567 aaPredicted RBP13.4□□□□□ -0.26
PTPN13-203ENST00000427191 SUSD5O60279 629 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 HOXD13P35453 343 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 OR1D4P47884 311 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 C17orf67Q0P5P2 114 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 BAMBIQ13145 260 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 RTL8BQ17RB0 113 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 MFSD9Q8NBP5 474 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 LMO3Q8TAP4 145 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 CIB3Q96Q77 187 aaPredicted RBP13.4□□□□□ -0.26
PTPN13-203ENST00000427191 NALCNQ8IZF0 1738 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 TRAV36DV7A0A075B6V5 113 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 MEIS3P2A8K0S8 358 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 E5RGE8 158 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 H2AFB1P0C5Y9 115 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 ENPP1P22413 925 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 GABRA4P48169 554 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms