RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 OR2T7P0C7T2 308 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 TFPIP10646 304 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 GTF2E2P29084 291 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 NOVA1P51513 510 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 TUBA1BP68363 451 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 TGIF1Q15583 401 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 ZNF239Q16600 458 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 GLYR1Q49A26 553 aaPredicted RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 LIPKQ5VXJ0 399 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 TUBA1AQ71U36 451 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 OR10H4Q8NGA5 316 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 OR51L1Q8NGJ5 315 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 OR2T27Q8NH04 317 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 UBL7Q96S82 380 aaPredicted RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 ALG12Q9BV10 488 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 CHST11Q9NPF2 352 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 TRAPPC4Q9Y296 219 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 A0A1W2PQL4 384 aaPredicted RBP13.66□□□□□ -0.22
ACTB-204ENST00000425660 G3V3Y1 287 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 XKRYO14609 159 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 NEURL1O76050 574 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 LALBAP00709 142 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 CRYBB2P43320 205 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 CAPZA2P47755 286 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 ZNF85Q03923 595 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 TLE3Q04726 772 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 ABHD17BQ5VST6 288 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 EEF1A1P5Q5VTE0 462 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 PXKQ7Z7A4 578 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 OR6V1Q8N148 313 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 CLEC1AQ8NC01 280 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 ZNF248Q8NDW4 579 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 ATP6V1C2Q8NEY4 427 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 OR5M1Q8NGP8 315 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 OR2T4Q8NH00 348 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 SPRYD4Q8WW59 207 aaPredicted RBP13.66□□□□□ -0.22
ACTB-204ENST00000425660 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 DACH2Q96NX9 599 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 CHCHD6Q9BRQ6 235 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 CENPOQ9BU64 300 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 VSX1Q9NZR4 365 aaPredicted RBP13.66□□□□□ -0.22
ACTB-204ENST00000425660 LRFN1Q9P244 771 aa13.66□□□□□ -0.22
ACTB-204ENST00000425660 SF3B6Q9Y3B4 125 aaKnown RBP13.66□□□□□ -0.22
ACTB-204ENST00000425660 DCHS1Q96JQ0 3298 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 A0A0G2JMM0 328 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 A0A1W2PPB8 328 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 A0A1W2PRG6 482 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 A0A1W2PRS3 328 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 PRSS37A4D1T9 235 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 LRRC3CA6NJW4 275 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 KIR3DP1A8MWS1 328 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 DCTN6O00399 190 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 ARHGEF9O43307 516 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 GPX5O75715 221 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 RENP00797 406 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 ITGA3P26006 1051 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 SRD5A2P31213 254 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 CD96P40200 585 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 DNASE1L1P49184 302 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 P2RY4P51582 365 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 SOX8P57073 446 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 USP43Q70EL4 1123 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 ZBTB46Q86UZ6 589 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 GHDCQ8N2G8 530 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 UFD1Q92890 307 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 MIB2Q96AX9 1013 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 TSSK2Q96PF2 358 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 SYT4Q9H2B2 425 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 ISG20L2Q9H9L3 353 aaKnown RBP13.65□□□□□ -0.22
ACTB-204ENST00000425660 DEPPQ9NTK1 212 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 BABAM2Q9NXR7 383 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 STUB1Q9UNE7 303 aa13.65□□□□□ -0.22
ACTB-204ENST00000425660 RPH3AQ9Y2J0 694 aaPredicted RBP13.65□□□□□ -0.22
ACTB-204ENST00000425660 MRPS18CQ9Y3D5 142 aaKnown RBP13.65□□□□□ -0.22
ACTB-204ENST00000425660 CLPXO76031 633 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 PLGP00747 810 aaPredicted RBP13.64□□□□□ -0.23
ACTB-204ENST00000425660 HLA-DOBP13765 273 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 GABRA5P31644 462 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 ACVR1BP36896 505 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 TGFBR1P36897 503 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 OC90Q02509 493 aaPredicted RBP13.64□□□□□ -0.23
ACTB-204ENST00000425660 GPR50Q13585 617 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 SOWAHCQ53LP3 525 aaPredicted RBP13.64□□□□□ -0.23
ACTB-204ENST00000425660 TUBA3EQ6PEY2 450 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 CD200R1LQ6Q8B3 271 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 NHLRC1Q6VVB1 395 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 LINC00299Q6ZSB3 139 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 OR6K6Q8NGW6 343 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 JSRP1Q96MG2 331 aaPredicted RBP13.64□□□□□ -0.23
ACTB-204ENST00000425660 TBX5Q99593 518 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 DCSTAMPQ9H295 470 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 TMEM185BQ9H7F4 350 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 DLL3Q9NYJ7 618 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 ABI3Q9P2A4 366 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 B3GAT1Q9P2W7 334 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 DKKL1Q9UK85 242 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 ZMIZ1Q9ULJ6 1067 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 FKBP7Q9Y680 259 aa13.64□□□□□ -0.23
ACTB-204ENST00000425660 DOCK10Q96BY6 2186 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms