RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RAB40ALP0C0E4 278 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC35E2P0CK97 266 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 GUCA2AQ02747 115 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 TFF2Q03403 129 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 LTBQ06643 244 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 C2orf68Q2NKX9 166 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ELOA3BQ3SY89 546 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 Q499Y3 187 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 TMEM196Q5HYL7 178 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ELFN2Q5R3F8 820 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 EXOSC6Q5RKV6 272 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ADGRG3Q86Y34 549 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 METTL27Q8N6F8 245 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ZBTB44Q8NCP5 570 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ELOA3Q8NG57 546 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 OR51D1Q8NGF3 324 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 TNFAIP8L1Q8WVP5 186 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 RAB40AQ8WXH6 277 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 PHYHIPQ92561 330 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 NSMAFQ92636 917 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 DVL3Q92997 716 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 CTHRC1Q96CG8 243 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 MS4A7Q9GZW8 240 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 Q9N2J8 555 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 FRRS1LQ9P0K9 344 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF337Q9Y3M9 751 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ARHGEF17Q96PE2 2063 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 TRAV8-7A0A075B6U6 113 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 TRAV18A0A075B6X5 111 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 A0A087WUJ7 227 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 DCTN6O00399 190 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GOSR2O14653 212 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 PPM1BO75688 479 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 VSIG10L2P0DP72 767 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 HPGDP15428 266 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 NUP62P37198 522 aaPredicted RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GPM6BQ13491 265 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ALKBH1Q13686 389 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GGTLC2Q14390 218 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 HLXQ14774 488 aaPredicted RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 NFATC4Q14934 902 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 NHLRC3Q5JS37 347 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 KIAA1324Q6UXG2 1013 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 DPY19L4Q7Z388 723 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GPAT4Q86UL3 456 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GLB1L2Q8IW92 636 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 OR4D10Q8NGI6 311 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 OR51A4Q8NGJ6 313 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 BAHD1Q8TBE0 780 aaPredicted RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 TMEM106AQ96A25 262 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 MIB2Q96AX9 1013 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SIPA1Q96FS4 1042 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 BMFQ96LC9 184 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 CMTM3Q96MX0 182 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ELF4Q99607 663 aaPredicted RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 KCNK15Q9H427 330 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 FAM60AQ9NP50 221 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 MRM2Q9UI43 246 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 LAMP5Q9UJQ1 280 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 TCRBV16S1A1N1A0A5B0 115 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SERINC4A6NH21 518 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 C2orf74A8MZ97 194 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF749O43361 778 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SULT1B1O43704 296 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 NDUFB6O95139 128 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF35P13682 527 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GTF2F2P13984 249 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 MAZP56270 477 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SEC61A1P61619 476 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 BTG2P78543 158 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 MELKQ14680 651 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 C4orf46Q504U0 113 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 LINC01590Q5TEZ4 76 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF626Q68DY1 528 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 NPSR1Q6W5P4 371 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 LINC00114Q6XXX2 140 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 HDDC2Q7Z4H3 204 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SPICQ8N5J4 248 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 LSM14AQ8ND56 463 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 LMF1Q96S06 567 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 MFRPQ9BY79 579 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 POLE3Q9NRF9 147 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF275Q9NSD4 429 aaPredicted RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ERVK-19Q9WJR5 959 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SESN1Q9Y6P5 492 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SEC16AO15027 2179 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 K7EQS6 105 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ARPC3O15145 178 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 RP2O75695 350 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 HLA-DQA2P01906 255 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 HOXB2P14652 356 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 COL9A1P20849 921 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 S1PR1P21453 382 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 NTSR1P30989 418 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 S100A11P31949 105 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 EFNB2P52799 333 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 DLX5P56178 289 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ZMYND11Q15326 602 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 ITPRIPL2Q3MIP1 535 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms