RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CRLF2Q9HC73 371 aa8.89□□□□□ -0.99
CMSS1-201ENST00000421999 FBXO34Q9NWN3 711 aa8.89□□□□□ -0.99
CMSS1-201ENST00000421999 ARID1AO14497 2285 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 PIP5K1CO60331 668 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF432O94892 652 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 MT-ATP6P00846 226 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 DBHP09172 617 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 SLC2A2P11168 524 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 FKBP2P26885 142 aaKnown RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 IDH3GP51553 393 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ILKQ13418 452 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 COL19A1Q14993 1142 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF628Q5EBL2 1059 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 TMED4Q7Z7H5 227 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 IQCF2Q8IXL9 164 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 BEST3Q8N1M1 668 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 DNAAF1Q8NEP3 725 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 PFN4Q8NHR9 129 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ABHD5Q8WTS1 349 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ST8SIA1Q92185 356 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ANKRD9Q96BM1 317 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 RASD2Q96D21 266 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 FAM173AQ9BQD7 235 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 PAPOLGQ9BWT3 736 aaKnown RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 LAT2Q9GZY6 243 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 HHLA2Q9UM44 414 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 WASF3Q9UPY6 502 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 A0A087WUU8 490 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 TEX13DA0A0J9YY54 714 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 LRRN3E7EW58 273 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 HRKO00198 91 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 GDF9O60383 454 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ITGB2P05107 769 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 CFL1P23528 166 aaKnown RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 WNT4P56705 351 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 TRAM1Q15629 374 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 TMEM244Q5VVB8 128 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 AWAT2Q6E213 333 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 MEPCEQ7L2J0 689 aaKnown RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 TOMM5Q8N4H5 51 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 DRAXINQ8NBI3 349 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF501Q96CX3 271 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 SMURF1Q9HCE7 757 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ACER3Q9NUN7 267 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 SHISA8B8ZZ34 492 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 C4orf51C9J302 202 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 TIMM8AO60220 97 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 MPIG6BO95866 241 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 SLC2A5P22732 501 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 HLCSP50747 726 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 FOXF1Q12946 379 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 MFAP5Q13361 173 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 SMN1Q16637 294 aaKnown RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 CLPPQ16740 277 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF782Q6ZMW2 699 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 SIMC1Q8NDZ2 872 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 PPP1R35Q8TAP8 253 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 TM4SF19Q96DZ7 209 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 PROCRQ9UNN8 238 aa8.88□□□□□ -0.99
CMSS1-201ENST00000421999 EXO1Q9UQ84 846 aaKnown RBP8.88□□□□□ -0.99
CMSS1-201ENST00000421999 C21orf140B9A014 251 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 DVL2O14641 736 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 OR7A10O76100 309 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 C21orf58P58505 322 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 TUBA4AP68366 448 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 CSRP2Q16527 193 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 THOC7Q6I9Y2 204 aaKnown RBP8.87□□□□□ -0.99
CMSS1-201ENST00000421999 TRILQ7L0X0 811 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 WFDC8Q8IUA0 241 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 PM20D2Q8IYS1 436 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 GCNT2Q8N0V5 402 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 ROBO4Q8WZ75 1007 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 INTS12Q96CB8 462 aaKnown RBP8.87□□□□□ -0.99
CMSS1-201ENST00000421999 C4orf36Q96KX1 117 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 GINS4Q9BRT9 223 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 PAK1IP1Q9NWT1 392 aaPredicted RBP8.87□□□□□ -0.99
CMSS1-201ENST00000421999 MED29Q9NX70 200 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 THADAQ6YHU6 1953 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 MEGF11A6BM72 1044 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 SLC22A20A6NK97 555 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 DOK2O60496 412 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF44P15621 663 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 PITPNBP48739 271 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 FOXK2Q01167 660 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF91Q05481 1191 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 C11orf91Q3C1V1 193 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF404Q494X3 552 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 C4orf46Q504U0 113 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 SPINK14Q6IE38 97 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 C3P1Q6ZMU1 363 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 TMEM163Q8TC26 289 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 C15orf40Q8WUR7 153 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 FCRL1Q96LA6 429 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 UBQLN3Q9H347 655 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 HRH3Q9Y5N1 445 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 CBX7O95931 251 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 PNLIPP16233 465 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 DRD5P21918 477 aa8.87□□□□□ -0.99
CMSS1-201ENST00000421999 CLN3Q13286 438 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms