RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 TMEM35AQ53FP2 167 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 METRNLQ641Q3 311 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 ARHGAP11AQ6P4F7 1023 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 TMPRSS11FQ6ZWK6 438 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 SLC16A13Q7RTY0 426 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 C12orf40Q86WS4 652 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 C12orf45Q8N5I9 185 aaPredicted RBP15.21■□□□□ 0.03
PKP4-204ENST00000421462 TREM1Q9NP99 234 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 COMMD9Q9P000 198 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.03
PKP4-204ENST00000421462 TRAV20A0A0B4J274 112 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 BLOC1S5-TXNDC5H3BN57 136 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 DOK2O60496 412 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 RAB40ALP0C0E4 278 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 CST5P28325 142 aaPredicted RBP15.21■□□□□ 0.03
PKP4-204ENST00000421462 HOXA1P49639 335 aaPredicted RBP15.21■□□□□ 0.03
PKP4-204ENST00000421462 SRSF3P84103 164 aaKnown RBP15.21■□□□□ 0.03
PKP4-204ENST00000421462 ZNF234Q14588 700 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 ARHGAP19Q14CB8 494 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 ZNF627Q7L945 461 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 ZNF619Q8N2I2 560 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 RAB40AQ8WXH6 277 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 ADAD1Q96M93 576 aaKnown RBP15.21■□□□□ 0.03
PKP4-204ENST00000421462 APMAPQ9HDC9 416 aa15.21■□□□□ 0.03
PKP4-204ENST00000421462 KIAA1549LQ6ZVL6 1849 aa15.21■□□□□ 0.02
PKP4-204ENST00000421462 OR2AT4A6NND4 320 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 ZNF705EA8MWA4 302 aaPredicted RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 FARS2O95363 451 aaKnown RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 HTRA4P83105 476 aaPredicted RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 POU4F2Q12837 409 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 IL10RAQ13651 578 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 ZNF676Q8N7Q3 588 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR5T2Q8NGG2 359 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 LINC00615Q96LM1 132 aaPredicted RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 ZNF275Q9NSD4 429 aaPredicted RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 FLRT3Q9NZU0 649 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 TSPAN11A1L157 253 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 RFPL4AA6NLU0 287 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 RFPL4AL1F8VTS6 287 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 VEGFDO43915 354 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 NID1P14543 1247 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 MGMTP16455 207 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 NFYBP25208 207 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 DDX6P26196 483 aaKnown RBP eCLIP15.2■□□□□ 0.02
PKP4-204ENST00000421462 DLSTP36957 453 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 MEOX2P50222 304 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 RAB28P51157 221 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 DUSP8Q13202 625 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 RAB11FIP2Q7L804 512 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 LRRTM1Q86UE6 522 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 FAM219AQ8IW50 185 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 RNF113BQ8IZP6 322 aaKnown RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR2L13Q8N349 312 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR4E2Q8NGC2 313 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR1J2Q8NGS2 313 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR5AK2Q8NH90 309 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 TMEM106AQ96A25 262 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 SPEGQ15772 3267 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 TBC1D3KA0A087X1G2 549 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR14I1A6ND48 311 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 TBC1D3BA6NDS4 549 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 TBC1D3FA6NER0 549 aaPredicted RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 H7C417 338 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 TO15178 435 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 CTNSO60931 367 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 PRNPP04156 253 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 AMY2AP04746 511 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR4E1P0C645 316 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 UBBP0CG47 229 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 UBCP0CG48 685 aaKnown RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 RPA2P15927 270 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 WASP42768 502 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 RPS27AP62979 156 aaKnown RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 UBA52P62987 128 aaKnown RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 HFEQ30201 348 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 ARHGAP11BQ3KRB8 267 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 LIPNQ5VXI9 398 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 TBC1D3GQ6DHY5 549 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 RPL13AP3Q6NVV1 102 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 ZNF761Q86XN6 746 aaPredicted RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 EIF4E3Q8N5X7 224 aaKnown RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR52E1Q8NGJ3 308 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 CASTOR1Q8WTX7 329 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 NKD1Q969G9 470 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 ATG5Q9H1Y0 275 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 MTFP1Q9UDX5 166 aa15.2■□□□□ 0.02
PKP4-204ENST00000421462 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.2■□□□□ 0.02
PKP4-204ENST00000421462 OR6C76A6NM76 312 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 MPTX1A8MV57 137 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 LINC00587B1AMM8 73 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 SULT1C2O00338 296 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 DBIP07108 87 aaKnown RBP15.19■□□□□ 0.02
PKP4-204ENST00000421462 GP1BAP07359 652 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 CCDC157Q569K6 752 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 H3F3CQ6NXT2 135 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 RHOUQ7L0Q8 258 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 CRIPAKQ8N1N5 446 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 SYS1Q8N2H4 156 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 OR4K14Q8NGD5 310 aa15.19■□□□□ 0.02
PKP4-204ENST00000421462 FGF13Q92913 245 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms