RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ATF1P18846 271 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 NANOS3P60323 173 aaKnown RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 ASAH1Q13510 395 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 LPAL2Q16609 132 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 ZSWIM7Q19AV6 140 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 ATAD3CQ5T2N8 411 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 ZNF574Q6ZN55 896 aaPredicted RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 FAM220AQ7Z4H9 259 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 EID2Q8N6I1 236 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 POMGNT2Q8NAT1 580 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 OR1N1Q8NGS0 311 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 OR14A16Q8NHC5 309 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 SMIM19Q96E16 107 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 CDX2Q99626 313 aaPredicted RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 NPAS1Q99742 590 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 THAP7Q9BT49 309 aaPredicted RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 TMEM185BQ9H7F4 350 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 RNF121Q9H920 327 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 AKIRIN1Q9H9L7 192 aaPredicted RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 RANGRFQ9HD47 186 aaPredicted RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 HAO2Q9NYQ3 351 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 TMEM131Q92545 1883 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 IGKV3D-11A0A0A0MRZ8 115 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 H3BML4 177 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SEC14L5O43304 696 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SUSD5O60279 629 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SCRG1O75711 98 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 RENP00797 406 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 PGCP20142 388 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 CCL7P80098 99 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ETFDHQ16134 617 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 LIPNQ5VXI9 398 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 LYSMD4Q5XG99 296 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SLC6A19Q695T7 634 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 PWWP2BQ6NUJ5 590 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 FIP1L1Q6UN15 594 aaKnown RBP9.93□□□□□ -0.82
DDX56-203ENST00000421223 SLITRK4Q8IW52 837 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 DNAAF1Q8NEP3 725 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 TSPAN32Q96QS1 320 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ABHD1Q96SE0 405 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ABCG5Q9H222 651 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 BEX1Q9HBH7 125 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SLC22A11Q9NSA0 550 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 MED11Q9P086 117 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 NOX1Q9Y5S8 564 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 WDFY3Q8IZQ1 3526 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 H3BMH7 237 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 RGS13O14921 159 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ARPC3O15145 178 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SIGLEC6O43699 453 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ZNF354AO60765 605 aaPredicted RBP9.93□□□□□ -0.82
DDX56-203ENST00000421223 SLC19A2O60779 497 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ZFPL1O95159 310 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SDHAP31040 664 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 GPLD1P80108 840 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ZFP69Q49AA0 526 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 NKAIN1Q4KMZ8 207 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 MESTQ5EB52 335 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 FNDC7Q5VTL7 733 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 MVB12AQ96EY5 273 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 GAL3ST1Q99999 423 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 JAM3Q9BX67 310 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 TP63Q9H3D4 680 aaPredicted RBP9.93□□□□□ -0.82
DDX56-203ENST00000421223 HIF3AQ9Y2N7 669 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 TMED7-TICAM2A0A0A6YYA0 188 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 K7ESF4 209 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SLC16A7O60669 478 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 ARL6IP5O75915 188 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 IFI6P09912 130 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 FBXO45P0C2W1 286 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 POU3F3P20264 500 aaPredicted RBP9.93□□□□□ -0.82
DDX56-203ENST00000421223 EVI2BP34910 448 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 PITPNBP48739 271 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 MEP1BQ16820 701 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 HYAL4Q2M3T9 481 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 CEP78Q5JTW2 689 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 RPL22L1Q6P5R6 122 aaKnown RBP9.93□□□□□ -0.82
DDX56-203ENST00000421223 FAM199XQ6PEV8 388 aaPredicted RBP9.93□□□□□ -0.82
DDX56-203ENST00000421223 ZNF676Q8N7Q3 588 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 DNASE2BQ8WZ79 361 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 NSMAFQ92636 917 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 SLC41A2Q96JW4 573 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 TMEM43Q9BTV4 400 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 LAT2Q9GZY6 243 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 DUSP15Q9H1R2 295 aaPredicted RBP9.93□□□□□ -0.82
DDX56-203ENST00000421223 NKIRAS2Q9NYR9 191 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 TMED7Q9Y3B3 224 aa9.93□□□□□ -0.82
DDX56-203ENST00000421223 KNTC1P50748 2209 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 IDH3BO43837 385 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 AKR7A3O95154 331 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 SERPINA3P01011 423 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 MAS1P04201 325 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 SPARCP09486 303 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 PTHLHP12272 177 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 IL11P20809 199 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 RNF4P78317 190 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 SQSTM1Q13501 440 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 COL28A1Q2UY09 1125 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 LINC01590Q5TEZ4 76 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms