RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DNAJA3Q96EY1 480 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ARL5BQ96KC2 179 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 C20orf173Q96LM9 149 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ANKRD27Q96NW4 1050 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 PSD2Q9BQI7 771 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 MED18Q9BUE0 208 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 KLHL4Q9C0H6 718 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 OR11A1Q9GZK7 315 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 CCDC134Q9H6E4 229 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 PLSCR4Q9NRQ2 329 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 MRPS18AQ9NVS2 196 aaKnown RBP6.13□□□□□ -1.43
HMGN1-205ENST00000419378 KLHL28Q9NXS3 571 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 KLHL9Q9P2J3 617 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 NDRG3Q9UGV2 375 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ING1Q9UK53 422 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-205ENST00000419378 IFT52Q9Y366 437 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 NDUFAF1Q9Y375 327 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TMED7Q9Y3B3 224 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 HDGFL3Q9Y3E1 203 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF716A6NP11 495 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF724A8MTY0 619 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 EVPLLA8MZ36 301 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF814B7Z6K7 855 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 SULT2B1O00204 365 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 PMS2P2O95744 297 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 F8P00451 2351 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 GRPP07492 148 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 YES1P07947 543 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ETS2P15036 469 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 FKBP2P26885 142 aaKnown RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 PRKAR1BP31321 381 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 CLK1P49759 484 aaKnown RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 MTPNP58546 118 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 COPZ1P61923 177 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 RPS16P62249 146 aaKnown RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 RASGEF1BQ0VAM2 473 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 SCARB2Q14108 478 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 SELPLGQ14242 412 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 CAPRIN1Q14444 709 aaKnown RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 REEP3Q6NUK4 255 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 STAC2Q6ZMT1 411 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 NUFIP2Q7Z417 695 aaKnown RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 COMTD1Q86VU5 262 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 CDC20BQ86Y33 519 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 KRT73Q86Y46 540 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 LURAP1LQ8IV03 231 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 DDIT4LQ96D03 193 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 NMD3Q96D46 503 aaKnown RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ZHX1-C8orf76Q96EF9 292 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 WFIKKN1Q96NZ8 548 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF300Q96RE9 604 aaPredicted RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 CGREF1Q99674 301 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 LIME1Q9H400 295 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 TMEM38AQ9H6F2 299 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ARMC7Q9H6L4 198 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 FANCFQ9NPI8 374 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 SAR1AQ9NR31 198 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 C6orf203Q9P0P8 240 aaPredicted RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 TMEM181Q9P2C4 612 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ITGB1BP2Q9UKP3 347 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 ANGPT4Q9Y264 503 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 VPS13CQ709C8 3753 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 MAP1AP78559 2803 aaPredicted RBP6.12□□□□□ -1.43
HMGN1-205ENST00000419378 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
HMGN1-205ENST00000419378 FREM1Q5H8C1 2179 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 IGKV3D-15A0A087WSY6 115 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 A0A1W2PPR1 153 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 DEFB108AA8MXU0 73 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 FXYD1O00168 92 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 FBP2O00757 339 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 CASKO14936 926 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 RAMP1O60894 148 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 GCM2O75603 506 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 PPP3CBP16298 524 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 PSMB1P20618 241 aaKnown RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 CRYGSP22914 178 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 TNFSF4P23510 183 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 CXCR1P25024 350 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 EDNRAP25101 427 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 HTR2AP28223 471 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 AQP1P29972 269 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 IDUAP35475 653 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 MDH1P40925 334 aaKnown RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 OR3A2P47893 321 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 UCP3P55916 312 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 OR2B6P58173 313 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 SLC35A1P78382 337 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 H3F3AP84243 136 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 HOXC5Q00444 222 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 PLP2Q04941 152 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 BNIP2Q12982 314 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 KLF10Q13118 480 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 DAG1Q14118 895 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 PDK3Q15120 406 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 CYP51A1Q16850 503 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 TRMT5Q32P41 509 aaKnown RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 COQ5Q5HYK3 327 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 WBP2NLQ6ICG8 309 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 DHRS4L2Q6PKH6 230 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms