RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KIR2DL5BQ8NHK3 375 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 PANX1Q96RD7 426 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 NUP58Q9BVL2 599 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 DMAP1Q9NPF5 467 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 TUBG2Q9NRH3 451 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 SMOXQ9NWM0 555 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 CLCF1Q9UBD9 225 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 TRAF3IP3Q9Y228 551 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 TMEM94Q12767 1356 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 IGKV2-28A0A075B6P5 120 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 LRP5LA4QPB2 252 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 NPIPA7E9PJI5 369 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 UPK3AO75631 287 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 IGKV2D-28P01615 120 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 NPIPA8P0DM63 369 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR8G3PP0DMU2 310 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 YWHABP31946 246 aaKnown RBP2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 PMELP40967 661 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 RPS9P46781 194 aaKnown RBP2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 CASP4P49662 377 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 ETV1P50549 477 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 RPL23AP62750 156 aaKnown RBP2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 MOBPQ13875 183 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 EXOC3L2Q2M3D2 409 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 LRRC66Q68CR7 880 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 TIGD3Q6B0B8 471 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 UQCC3Q6UW78 93 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 OTUD6AQ7L8S5 288 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 MOB3BQ86TA1 216 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 ECHDC2Q86YB7 292 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 SAXO1Q8IYX7 474 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 CLEC4FQ8N1N0 589 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF561Q8N587 486 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 DUSP18Q8NEJ0 188 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 TRMT10AQ8TBZ6 339 aaKnown RBP2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 CMTM7Q96FZ5 175 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 PAGE5Q96GU1 130 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 CEP170P1Q96L14 293 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 PELOQ9BRX2 385 aaKnown RBP2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 FAM192AQ9GZU8 254 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 EXO5Q9H790 373 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 ANKRA2Q9H9E1 313 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 UFSP2Q9NUQ7 469 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC25A37Q9NYZ2 338 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 PIPOXQ9P0Z9 390 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 CFAP45Q9UL16 551 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 NPIPA1Q9UND3 350 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 MEMO1Q9Y316 297 aa2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 KIF26AQ9ULI4 1882 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P49-201ENST00000418882 MROH5Q6ZUA9 1318 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 KIF16BQ96L93 1317 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 A0A075B6Q4 140 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 BTBD17A6NE02 478 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 M0QX08 132 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 AGPAT2O15120 278 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 AKR7A2O43488 359 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 STAG3L3P0CL85 134 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC2A3P11169 496 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 ADRB3P13945 408 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 COX5AP20674 150 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 CALCRP30988 508 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 HOXA9P31269 272 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC11A1P49279 550 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 MNAT1P51948 309 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 ATP5IP56385 69 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 CARD18P57730 90 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 HERVK_113P61574 105 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLAQ13239 276 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 TPD52L1Q16890 204 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 PIGGQ5H8A4 983 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 PRAMEF5Q5TYX0 476 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 AADACL4Q5VUY2 407 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 PRAMEF6Q5VXH4 476 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF620Q6ZNG0 422 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF571Q7Z3V5 609 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC26A11Q86WA9 606 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 PAQR7Q86WK9 346 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 NBPF5PQ86XG9 351 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 C12orf56Q8IXR9 622 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR6X1Q8NH79 312 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF596Q8TC21 504 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC2A14Q8TDB8 520 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 MTMR9Q96QG7 549 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 PLIN2Q99541 437 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 MRPL45Q9BRJ2 306 aaKnown RBP2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 RTBDNQ9BSG5 229 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 DEFB127Q9H1M4 99 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 TPK1Q9H3S4 243 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 FANCEQ9HB96 536 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 SPATA7Q9P0W8 599 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 DEC1Q9P2X7 70 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF639Q9UID6 485 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 GNPTGQ9UJJ9 305 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 CDH9Q9ULB4 789 aa2.49□□□□□ -2.01
HMGB1P49-201ENST00000418882 NSG1A0A0A6YYJ2 146 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 IGKV6-21A0A0C4DH24 114 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 RBMY1BA6NDE4 496 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 RBMY1EA6NEQ0 496 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 SNTNA6NMZ2 147 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 IDSB3KWA1 339 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms