RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 ALG1L2C9J202 215 aa2.38□□□□□ -2.03
APP-207ENST00000415997 C9JVG2 144 aa2.38□□□□□ -2.03
APP-207ENST00000415997 AKAP10O43572 662 aa2.38□□□□□ -2.03
APP-207ENST00000415997 SCO2O43819 266 aa2.38□□□□□ -2.03
APP-207ENST00000415997 PROSCO94903 275 aa2.38□□□□□ -2.03
APP-207ENST00000415997 THY1P04216 161 aa2.38□□□□□ -2.03
APP-207ENST00000415997 QDPRP09417 244 aa2.38□□□□□ -2.03
APP-207ENST00000415997 LINGO3P0C6S8 592 aa2.38□□□□□ -2.03
APP-207ENST00000415997 CTAGE8P0CG41 777 aa2.38□□□□□ -2.03
APP-207ENST00000415997 RBMY1CP0DJD4 496 aa2.38□□□□□ -2.03
APP-207ENST00000415997 PF4V1P10720 104 aa2.38□□□□□ -2.03
APP-207ENST00000415997 THRBP10828 461 aa2.38□□□□□ -2.03
APP-207ENST00000415997 CPN2P22792 545 aa2.38□□□□□ -2.03
APP-207ENST00000415997 ELK4P28324 431 aa2.38□□□□□ -2.03
APP-207ENST00000415997 HPDP32754 393 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 MTIF2P46199 727 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 ASMTP46597 345 aa2.38□□□□□ -2.03
APP-207ENST00000415997 FGF12P61328 243 aa2.38□□□□□ -2.03
APP-207ENST00000415997 RAE1P78406 368 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 CCL8P80075 99 aa2.38□□□□□ -2.03
APP-207ENST00000415997 COX10Q12887 443 aa2.38□□□□□ -2.03
APP-207ENST00000415997 ZNF155Q12901 538 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 CSTF3Q12996 717 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 IFT88Q13099 833 aa2.38□□□□□ -2.03
APP-207ENST00000415997 SNTB2Q13425 540 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 CUL1Q13616 776 aa2.38□□□□□ -2.03
APP-207ENST00000415997 SLC29A2Q14542 456 aa2.38□□□□□ -2.03
APP-207ENST00000415997 RBBP5Q15291 538 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 PRICKLE4Q2TBC4 344 aa2.38□□□□□ -2.03
APP-207ENST00000415997 PCGF3Q3KNV8 242 aa2.38□□□□□ -2.03
APP-207ENST00000415997 TMEM155Q4W5P6 130 aa2.38□□□□□ -2.03
APP-207ENST00000415997 PHYHD1Q5SRE7 291 aa2.38□□□□□ -2.03
APP-207ENST00000415997 C6orf10Q5SRN2 563 aa2.38□□□□□ -2.03
APP-207ENST00000415997 ASPHD1Q5U4P2 390 aa2.38□□□□□ -2.03
APP-207ENST00000415997 GRHL2Q6ISB3 625 aa2.38□□□□□ -2.03
APP-207ENST00000415997 C6orf89Q6UWU4 347 aa2.38□□□□□ -2.03
APP-207ENST00000415997 APOOLQ6UXV4 268 aa2.38□□□□□ -2.03
APP-207ENST00000415997 TMIGD1Q6UXZ0 262 aa2.38□□□□□ -2.03
APP-207ENST00000415997 NPSR1Q6W5P4 371 aa2.38□□□□□ -2.03
APP-207ENST00000415997 CENPUQ71F23 418 aa2.38□□□□□ -2.03
APP-207ENST00000415997 ZNF771Q7L3S4 317 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 ZBTB46Q86UZ6 589 aa2.38□□□□□ -2.03
APP-207ENST00000415997 GPR180Q86V85 440 aa2.38□□□□□ -2.03
APP-207ENST00000415997 LRP11Q86VZ4 500 aa2.38□□□□□ -2.03
APP-207ENST00000415997 CALHM3Q86XJ0 350 aa2.38□□□□□ -2.03
APP-207ENST00000415997 CTAGE4Q8IX94 777 aa2.38□□□□□ -2.03
APP-207ENST00000415997 SPERTQ8NA61 448 aa2.38□□□□□ -2.03
APP-207ENST00000415997 OR2T6Q8NHC8 308 aa2.38□□□□□ -2.03
APP-207ENST00000415997 CD200R1Q8TD46 325 aa2.38□□□□□ -2.03
APP-207ENST00000415997 MAGEE2Q8TD90 523 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 C10orf82Q8WW14 230 aa2.38□□□□□ -2.03
APP-207ENST00000415997 RAB40AQ8WXH6 277 aa2.38□□□□□ -2.03
APP-207ENST00000415997 FBXL8Q96CD0 374 aa2.38□□□□□ -2.03
APP-207ENST00000415997 REXO5Q96IC2 774 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 LRGUKQ96M69 825 aa2.38□□□□□ -2.03
APP-207ENST00000415997 VSTM2LQ96N03 204 aa2.38□□□□□ -2.03
APP-207ENST00000415997 NAP1L3Q99457 506 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 KCNS3Q9BQ31 491 aa2.38□□□□□ -2.03
APP-207ENST00000415997 MCRIP2Q9BUT9 160 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 ELOVL1Q9BW60 279 aa2.38□□□□□ -2.03
APP-207ENST00000415997 ZNF717Q9BY31 904 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 TRIM15Q9C019 465 aa2.38□□□□□ -2.03
APP-207ENST00000415997 PPA2Q9H2U2 334 aa2.38□□□□□ -2.03
APP-207ENST00000415997 C10orf88Q9H8K7 445 aa2.38□□□□□ -2.03
APP-207ENST00000415997 COPS7BQ9H9Q2 264 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 PARVBQ9HBI1 364 aa2.38□□□□□ -2.03
APP-207ENST00000415997 SCRT2Q9NQ03 307 aa2.38□□□□□ -2.03
APP-207ENST00000415997 SDHAF3Q9NRP4 125 aa2.38□□□□□ -2.03
APP-207ENST00000415997 TREX1Q9NSU2 369 aa2.38□□□□□ -2.03
APP-207ENST00000415997 MED17Q9NVC6 651 aa2.38□□□□□ -2.03
APP-207ENST00000415997 MS4A12Q9NXJ0 267 aa2.38□□□□□ -2.03
APP-207ENST00000415997 DDX56Q9NY93 547 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 FLRT3Q9NZU0 649 aa2.38□□□□□ -2.03
APP-207ENST00000415997 OR5V1Q9UGF6 321 aa2.38□□□□□ -2.03
APP-207ENST00000415997 TRMT6Q9UJA5 497 aaKnown RBP2.38□□□□□ -2.03
APP-207ENST00000415997 ZNF490Q9ULM2 529 aaPredicted RBP2.38□□□□□ -2.03
APP-207ENST00000415997 VDAC3Q9Y277 283 aa2.38□□□□□ -2.03
APP-207ENST00000415997 CFL2Q9Y281 166 aa2.38□□□□□ -2.03
APP-207ENST00000415997 LRCH1Q9Y2L9 728 aa2.38□□□□□ -2.03
APP-207ENST00000415997 ASB4Q9Y574 426 aa2.38□□□□□ -2.03
APP-207ENST00000415997 SMAD5-AS1Q9Y6J3 95 aa2.38□□□□□ -2.03
APP-207ENST00000415997 IGLV3-9A0A075B6K5 115 aa2.37□□□□□ -2.03
APP-207ENST00000415997 IGHV1-69DA0A0B4J2H0 117 aa2.37□□□□□ -2.03
APP-207ENST00000415997 DPPA5A6NC42 116 aa2.37□□□□□ -2.03
APP-207ENST00000415997 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
APP-207ENST00000415997 RTCAO00442 366 aaKnown RBP2.37□□□□□ -2.03
APP-207ENST00000415997 IGHV1-69P01742 117 aa2.37□□□□□ -2.03
APP-207ENST00000415997 ATP1B1P05026 303 aa2.37□□□□□ -2.03
APP-207ENST00000415997 C8GP07360 202 aa2.37□□□□□ -2.03
APP-207ENST00000415997 WNT2P09544 360 aa2.37□□□□□ -2.03
APP-207ENST00000415997 CCDC172P0C7W6 258 aa2.37□□□□□ -2.03
APP-207ENST00000415997 ZNF35P13682 527 aa2.37□□□□□ -2.03
APP-207ENST00000415997 ZNF14P17017 642 aaPredicted RBP2.37□□□□□ -2.03
APP-207ENST00000415997 UQCRC2P22695 453 aa2.37□□□□□ -2.03
APP-207ENST00000415997 ME2P23368 584 aa2.37□□□□□ -2.03
APP-207ENST00000415997 CPT2P23786 658 aa2.37□□□□□ -2.03
APP-207ENST00000415997 CTNNA2P26232 953 aa2.37□□□□□ -2.03
APP-207ENST00000415997 RBL1P28749 1068 aa2.37□□□□□ -2.03
APP-207ENST00000415997 GLRXP35754 106 aa2.37□□□□□ -2.03
APP-207ENST00000415997 GJC1P36383 396 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms