RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 LAMP3Q9UQV4 416 aa8.41□□□□□ -1.06
LINC01090-201ENST00000415357 SH3GLB1Q9Y371 365 aa8.41□□□□□ -1.06
LINC01090-201ENST00000415357 FLNAP21333 2647 aaKnown RBP8.41□□□□□ -1.06
LINC01090-201ENST00000415357 MED13LQ71F56 2210 aa8.41□□□□□ -1.06
LINC01090-201ENST00000415357 TRAPPC13A5PLN9 417 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 SHISA9B4DS77 424 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 ZNF587BE7ETH6 402 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 MS4A18H0YCH9 400 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 SLC22A2O15244 555 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 CCDC22O60826 627 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 SERPINI2O75830 405 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 ZNF432O94892 652 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 H2AFB2P0C5Z0 115 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 DRD4P21917 467 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 OR1E2P47887 323 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 PTH2RP49190 550 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 SLC7A2P52569 658 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 TUBA1BP68363 451 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 TUBA4AP68366 448 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.06
LINC01090-201ENST00000415357 POU3F1Q03052 451 aaPredicted RBP8.4□□□□□ -1.06
LINC01090-201ENST00000415357 PMS2P3Q13401 168 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 C1DQ13901 141 aaKnown RBP8.4□□□□□ -1.06
LINC01090-201ENST00000415357 VEZF1Q14119 521 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 MS4A18Q3C1V0 323 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 CYBRD1Q53TN4 286 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 CARD17Q5XLA6 110 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 OR7E24Q6IFN5 339 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 ERICH5Q6P6B1 374 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 DEF8Q6ZN54 512 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 TUBA1AQ71U36 451 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 MICU2Q8IYU8 434 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 C1orf162Q8NEQ5 155 aaPredicted RBP8.4□□□□□ -1.06
LINC01090-201ENST00000415357 OR2T12Q8NG77 320 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 OR1K1Q8NGR3 316 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 RP9Q8TA86 221 aaKnown RBP8.4□□□□□ -1.06
LINC01090-201ENST00000415357 PROX1Q92786 737 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 FBXW5Q969U6 566 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 WDR89Q96FK6 387 aaPredicted RBP8.4□□□□□ -1.06
LINC01090-201ENST00000415357 SLC41A3Q96GZ6 507 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 OXGR1Q96P68 337 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 PRSS27Q9BQR3 290 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 EMC6Q9BV81 110 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 ASPNQ9BXN1 380 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 PCDHAC1Q9H158 963 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 MED29Q9NX70 200 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 B3GALT5Q9Y2C3 310 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 MAGED1Q9Y5V3 778 aaPredicted RBP8.4□□□□□ -1.06
LINC01090-201ENST00000415357 DSCAMO60469 2012 aa8.4□□□□□ -1.06
LINC01090-201ENST00000415357 ELOVL7A1L3X0 281 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 C11orf98E9PRG8 122 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 NME4O00746 187 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 SLC43A1O75387 559 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 SEC14L2O76054 403 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 CH25HO95992 272 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 DANCRP0C864 163 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 FUT4P22083 530 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 AHCYP23526 432 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 CD40P25942 277 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 LSP1P33241 339 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 KDELR2P33947 212 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 CDKN1AP38936 164 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 NUDT2P50583 147 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 UGT2B15P54855 530 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 TGFBR3Q03167 851 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 LIPEQ05469 1076 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 MFSD13AQ14CX5 517 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 PGGHGQ32M88 737 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 TBRG1Q3YBR2 411 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 PHYHD1Q5SRE7 291 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 TTC33Q6PID6 262 aaPredicted RBP8.39□□□□□ -1.07
LINC01090-201ENST00000415357 KLHL24Q6TFL4 600 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 TMEM108Q6UXF1 575 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 B3GLCTQ6Y288 498 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 YTHDF3Q7Z739 585 aaKnown RBP8.39□□□□□ -1.07
LINC01090-201ENST00000415357 NKAIN4Q8IVV8 208 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 UEVLDQ8IX04 471 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 SLC15A3Q8IY34 581 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 TMEM123Q8N131 208 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 LRRC75A-AS1Q8N1F1 130 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 C17orf78Q8N4C9 275 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 LRRC17Q8N6Y2 441 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 SCAIQ8N9R8 606 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 ADPRHL1Q8NDY3 354 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 OR6S1Q8NH40 331 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 SMAP2Q8WU79 429 aaPredicted RBP8.39□□□□□ -1.07
LINC01090-201ENST00000415357 RASSF5Q8WWW0 418 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 TXNDC15Q96J42 360 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 TPD52L3Q96J77 140 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 Q96MF0 132 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 OR2M2Q96R28 347 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 LINC00470Q9BZP3 86 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 MYLK2Q9H1R3 596 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 NELFAQ9H3P2 528 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 GSX1Q9H4S2 264 aaPredicted RBP8.39□□□□□ -1.07
LINC01090-201ENST00000415357 DLL4Q9NR61 685 aa8.39□□□□□ -1.07
LINC01090-201ENST00000415357 MRPL39Q9NYK5 338 aaKnown RBP8.39□□□□□ -1.07
LINC01090-201ENST00000415357 CISD1Q9NZ45 108 aaKnown RBP8.39□□□□□ -1.07
LINC01090-201ENST00000415357 BAG5Q9UL15 447 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms