RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CHRNA9Q9UGM1 479 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 IL20RAQ9UHF4 553 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 DKKL1Q9UK85 242 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 POFUT2Q9Y2G5 429 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 KLF13Q9Y2Y9 288 aaPredicted RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 PKD1L2Q7Z442 2459 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 SVILO95425 2214 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 FAM166BA8MTA8 275 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 H3BML4 177 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 CELA3AP09093 270 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 IL7P13232 177 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 HK1P19367 917 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 GDF1P27539 372 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 CTBP2P56545 445 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 PMP22Q01453 160 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 TIGD6Q17RP2 521 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 NRARPQ7Z6K4 114 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 COQ7Q99807 217 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 TMEM43Q9BTV4 400 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 PLA2G12AQ9BZM1 189 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 UCK2Q9BZX2 261 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 ZNF703Q9H7S9 590 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-202ENST00000414700 KCNN3Q9UGI6 736 aa13.99□□□□□ -0.17
SHMT2-202ENST00000414700 BOKQ9UMX3 212 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-202ENST00000414700 PCDHGA9Q9Y5G4 932 aaKnown RBP13.99□□□□□ -0.17
SHMT2-202ENST00000414700 B8ZZF3 427 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 CDK2AP1O14519 115 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 NPIPB7O75200 414 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 TRAPPC6AO75865 159 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 CH25HO95992 272 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 SHC1P29353 583 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 SOX6P35712 828 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 IFNGR2P38484 337 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 APOBEC1P41238 236 aaKnown RBP13.98□□□□□ -0.17
SHMT2-202ENST00000414700 HTR2BP41595 481 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 OR3A3P47888 321 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 FXYD6P3P58550 94 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 LTBQ06643 244 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 NPRL3Q12980 569 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 TSPAN31Q12999 210 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 GXYLT1Q4G148 440 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 Q5BKY6 102 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 RAET1LQ5VY80 246 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 TMPRSS11FQ6ZWK6 438 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 OR13C2Q8NGS9 318 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 GNPDA2Q8TDQ7 276 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 TAAR8Q969N4 342 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 ATRXP46100 2492 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 TRAV27A0A087WT01 109 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 A0A0G2JMP0 313 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 OR2M5A3KFT3 312 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 SAGP10523 405 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-202ENST00000414700 CHMP24386 653 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 FPR3P25089 353 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 POU1F1P28069 291 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 MAGEA5P43359 124 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 TMEM44Q2T9K0 475 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 CDONQ4KMG0 1287 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 RNFT1Q5M7Z0 435 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 GTPBP8Q8N3Z3 284 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-202ENST00000414700 ZBTB8AQ96BR9 441 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 ABHD17AQ96GS6 310 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 PITX2Q99697 317 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 PTDSS2Q9BVG9 487 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 GABARAPL3Q9BY60 117 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 ENKD1Q9H0I2 346 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 C14orf119Q9NWQ9 140 aa13.98□□□□□ -0.17
SHMT2-202ENST00000414700 MEIOCA2RUB1 952 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 KLRC4-KLRK1H3BQV0 150 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 WBP4O75554 376 aaKnown RBP13.97□□□□□ -0.17
SHMT2-202ENST00000414700 SRD5A2P31213 254 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 UCNP55089 124 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 FHL1Q13642 323 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 WIPI1Q5MNZ9 446 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-202ENST00000414700 IGFL3Q6UXB1 125 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 CD300LDQ6UXZ3 194 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 IDO2Q6ZQW0 420 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 OR8H2Q8N162 312 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 TMEM251Q8N6I4 163 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 ZFP62Q8NB50 900 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-202ENST00000414700 TMEM178AQ8NBL3 297 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 OR8D4Q8NGM9 314 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 OR51A7Q8NH64 312 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 SLC7A6Q92536 515 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 NEDD4LQ96PU5 975 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 SLC30A2Q9BRI3 323 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 COPS4Q9BT78 406 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 SLC19A3Q9BZV2 496 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 HHATLQ9HCP6 504 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 SEC14L4Q9UDX3 406 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHMT2-202ENST00000414700 A0A087WZY1 265 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 LOC100506127A0A0U1RQW1 187 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 A8MVM7 634 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 H3BN98 237 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 GLSO94925 669 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-202ENST00000414700 OSMP13725 252 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 GRK5P34947 590 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 RFX2P48378 723 aa13.97□□□□□ -0.17
SHMT2-202ENST00000414700 B3GALT5-AS1P59052 145 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms