RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 CCDC74AQ96AQ1 378 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 RASD2Q96D21 266 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 SIPA1Q96FS4 1042 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 ASB16Q96NS5 453 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 SLC17A9Q9BYT1 436 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 SLC19A3Q9BZV2 496 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 MS4A7Q9GZW8 240 aaPredicted RBP16.08■□□□□ 0.16
SDCBP-202ENST00000413219 FGF22Q9HCT0 170 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 A0A1B0GVT2 93 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 IMPA2O14732 288 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 TIMP1P01033 207 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 RLN1P04808 185 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 MELTFP08582 738 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 AKAIN1P0CW23 69 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 TMIGD3P0DMS9 266 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 ICAM2P13598 275 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 MPGP29372 298 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 CSF2RBP32927 897 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 ERVK-25P63136 954 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 PSG6Q00889 435 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 ZNHIT3Q15649 155 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 C2orf27AQ580R0 203 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 LIPNQ5VXI9 398 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 FBXW5Q969U6 566 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 DNTTIP1Q9H147 329 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 FRRS1LQ9P0K9 344 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 MRM2Q9UI43 246 aaKnown RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 MRPS2Q9Y399 296 aaKnown RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 GOLGA4Q13439 2230 aaKnown RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 A0A1W2PQU0 124 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 PRSS38A1L453 326 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 GGT3PA6NGU5 568 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 NPIPB9F8W1W9 429 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 PSMD9O00233 223 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 ZNF254O75437 659 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 EML2O95834 649 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 ABHD16AO95870 558 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 IGKV1D-16P01601 117 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 SLC35E2P0CK97 266 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 OR8G3PP0DMU2 310 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 APEHP13798 732 aaKnown RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 CTNNB1P35222 781 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 PSMD4P55036 377 aaKnown RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 LEG1Q6P5S2 330 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 SDR16C5Q8N3Y7 309 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 STPG2Q8N412 459 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 EXD3Q8N9H8 876 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 Q96M85 177 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 CCNL2Q96S94 520 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 ZFYVE21Q9BQ24 234 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 APMAPQ9HDC9 416 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 IFT46Q9NQC8 304 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 WSB2Q9NYS7 404 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-202ENST00000413219 GPR160Q9UJ42 338 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 SLC6A5Q9Y345 797 aa16.07■□□□□ 0.16
SDCBP-202ENST00000413219 ARPC4-TTLL3A0A0A6YYG9 625 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 TCRBV16S1A1N1A0A5B0 115 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 RFPL4AA6NLU0 287 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 RFPL4AL1F8VTS6 287 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 GNB5O14775 395 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 SCAMP1O15126 338 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 NDUFA2O43678 99 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 RPP14O95059 124 aaKnown RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 KAT7O95251 611 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 IGF2P01344 180 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 UBBP0CG47 229 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 UBCP0CG48 685 aaKnown RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 GRPRP30550 384 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 CD96P40200 585 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 RPS27AP62979 156 aaKnown RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 UBA52P62987 128 aaKnown RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 ENPP2Q13822 863 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 MANEAQ5SRI9 462 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 TMEFF1Q8IYR6 380 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 CA13Q8N1Q1 262 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 OR10Z1Q8NGY1 313 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 TNFAIP8L1Q8WVP5 186 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 THRSPQ92748 146 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 RERGQ96A58 199 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 ANKRD9Q96BM1 317 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 MRPS24Q96EL2 167 aaKnown RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 CAPNS2Q96L46 248 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 ADAD1Q96M93 576 aaKnown RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 DMRTA2Q96SC8 542 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 MNTQ99583 582 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 MFFQ9GZY8 342 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 C1orf198Q9H425 327 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 FBXL2Q9UKC9 423 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 PCOLCE2Q9UKZ9 415 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 HSPB2A8KAH6 182 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 FKTNO75072 461 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 SOX2P48431 317 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 HSPB2Q16082 182 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 DCAF12L2Q5VW00 463 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 PSRC1Q6PGN9 363 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 PRSS41Q7RTY9 318 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 JAZF1Q86VZ6 243 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 CDC20BQ86Y33 519 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms