RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 UBE2J2Q8N2K1 259 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 LRRC75AQ8NAA5 344 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 MOSPD2Q8NHP6 518 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 ZC3HAV1LQ96H79 300 aaKnown RBP11.58□□□□□ -0.56
HDAC8-210ENST00000412342 BOD1Q96IK1 185 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 LURAP1Q96LR2 239 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 MUS81Q96NY9 551 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 ALKBH3Q96Q83 286 aaPredicted RBP11.58□□□□□ -0.56
HDAC8-210ENST00000412342 EMC6Q9BV81 110 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 HIF3AQ9Y2N7 669 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 NOTCH2Q04721 2471 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 NAV2Q8IVL1 2488 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 SLC35F4A4IF30 521 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 OR6C65A6NJZ3 312 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 OR5H1A6NKK0 313 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 RPL36A-HNRNPH2H7BZ11 118 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 CDC42EP2O14613 210 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 RAD51DO75771 328 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 DNAJC8O75937 253 aaPredicted RBP11.57□□□□□ -0.56
HDAC8-210ENST00000412342 IFNGR1P15260 489 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 ITGA2P17301 1181 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 AHCYP23526 432 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 MPGP29372 298 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 DNAJA1P31689 397 aaKnown RBP11.57□□□□□ -0.56
HDAC8-210ENST00000412342 AQP2P41181 271 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 LIMS1P48059 325 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 TIMM23BQ5SRD1 257 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF730Q6ZMV8 503 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 ZDHHC21Q8IVQ6 265 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 C20orf196Q8IYI0 205 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 C1orf162Q8NEQ5 155 aaPredicted RBP11.57□□□□□ -0.56
HDAC8-210ENST00000412342 SEPHS2Q99611 448 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
HDAC8-210ENST00000412342 NELFAQ9H3P2 528 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 MAGIXQ9H6Y5 334 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF226Q9NYT6 803 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 UPB1Q9UBR1 384 aa11.57□□□□□ -0.56
HDAC8-210ENST00000412342 FAM32AQ9Y421 112 aaKnown RBP11.57□□□□□ -0.56
HDAC8-210ENST00000412342 TEX15Q9BXT5 2789 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.56□□□□□ -0.56
HDAC8-210ENST00000412342 SH3PXD2BA1X283 911 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 AQP12BA6NM10 295 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 BLOC1S5-TXNDC5H3BN57 136 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 RNF13O43567 381 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 AKAP8O43823 692 aaKnown RBP11.56□□□□□ -0.56
HDAC8-210ENST00000412342 SLC43A1O75387 559 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 SERPINI2O75830 405 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 OR6A2O95222 327 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 HIST1H2ABP04908 130 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF26P17031 533 aaPredicted RBP11.56□□□□□ -0.56
HDAC8-210ENST00000412342 GPR4P46093 362 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 OMPP47874 163 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 IL1RL1Q01638 556 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 FGD3Q5JSP0 725 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 C9orf135Q5VTT2 229 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 SLC35D2Q76EJ3 337 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 HIST3H2AQ7L7L0 130 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 TMEM200AQ86VY9 491 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 P2RY8Q86VZ1 359 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 CDC20BQ86Y33 519 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 AQP12AQ8IXF9 295 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 ADGRG5Q8IZF4 528 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 WDR31Q8NA23 367 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 OR4K5Q8NGD3 323 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 OR13C2Q8NGS9 318 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 OR6X1Q8NH79 312 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 HSD17B8Q92506 261 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 HIST1H2ACQ93077 130 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 MCUR1Q96AQ8 359 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF837Q96EG3 531 aaPredicted RBP11.56□□□□□ -0.56
HDAC8-210ENST00000412342 LRR1Q96L50 414 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 HS3ST6Q96QI5 342 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 CLEC4MQ9H2X3 399 aaPredicted RBP11.56□□□□□ -0.56
HDAC8-210ENST00000412342 NPAP1Q9NZP6 1156 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 SLC7A8Q9UHI5 535 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 POMPQ9Y244 141 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 SLC25A15Q9Y619 301 aa11.56□□□□□ -0.56
HDAC8-210ENST00000412342 TRAV27A0A087WT01 109 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 NPIPB13A6NJU9 1138 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 EFCAB9A8MZ26 197 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 NPIPB4C9JG80 1138 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF587BE7ETH6 402 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 CASKO14936 926 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 CLOCKO15516 846 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ATP5HO75947 161 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 IGHMP01871 453 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 F13BP05160 661 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 RRM2P31350 389 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 SLC9A3P48764 834 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 HMGA2P52926 109 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 BIDP55957 195 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 SPIBQ01892 262 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ROR2Q01974 943 aaKnown RBP11.55□□□□□ -0.56
HDAC8-210ENST00000412342 CAMK2DQ13557 499 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 MELKQ14680 651 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 LAPTM4AQ15012 233 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ARMC4Q5T2S8 1044 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 OR7E24Q6IFN5 339 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 WFDC8Q8IUA0 241 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms