RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 RAB7BQ96AH8 199 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 KIAA1143Q96AT1 154 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 FAF2Q96CS3 445 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MOCOSQ96EN8 888 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MRPL48Q96GC5 212 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MSANTD3Q96H12 275 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ARL5BQ96KC2 179 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 C10orf90Q96M02 699 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RNF145Q96MT1 663 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 LINC00052Q96N35 136 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CCDC115Q96NT0 180 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RBP7Q96R05 134 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GAL3ST4Q96RP7 486 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 PITX2Q99697 317 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GAL3ST1Q99999 423 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 P2RY13Q9BPV8 354 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF559Q9BR84 538 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC30A2Q9BRI3 323 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF577Q9BSK1 485 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 PI4K2AQ9BTU6 479 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TBCDQ9BTW9 1192 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TAPBPLQ9BX59 468 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TEKT3Q9BXF9 490 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 DGCR6LQ9BY27 220 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ACPTQ9BZG2 426 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC22A4Q9H015 551 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GABARAPL1Q9H0R8 117 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ING2Q9H160 280 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TMEM245Q9H330 911 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR51M1Q9H341 326 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 C5orf66Q9H5L9 145 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RANBP3Q9H6Z4 567 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 EGLN3Q9H6Z9 239 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TDRD3Q9H7E2 651 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RPF1Q9H9Y2 349 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RAB9BQ9NP90 201 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CCNB1IP1Q9NPC3 277 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 EXD2Q9NVH0 621 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 DNAJC11Q9NVH1 559 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 C2orf42Q9NWW7 574 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 HPF1Q9NWY4 346 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 LYARQ9NX58 379 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 BABAM2Q9NXR7 383 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GTSE1Q9NYZ3 720 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 NYAP2Q9P242 653 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 EXTL2Q9UBQ6 330 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TEKT2Q9UIF3 430 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 FBXL4Q9UKA2 621 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RNF6Q9Y252 685 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RPH3AQ9Y2J0 694 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MRPS7Q9Y2R9 242 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TPRKBQ9Y3C4 175 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 NPTNQ9Y639 398 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 COL1A2P08123 1366 aa2.09□□□□□ -2.08
HMGB3P2-201ENST00000411913 NHSQ6T4R5 1651 aa2.09□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF318Q5VUA4 2279 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 CDK5RAP2Q96SN8 1893 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 IGLV3-22A0A075B6J6 115 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 IGHV4-4A0A075B6R2 117 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 IQCMA0A1B0GVH7 501 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 LOC390937A0A1W2PQ73 354 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 C9orf170A2RU37 121 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 C7orf66A4D0T2 115 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 CCDC182A6NF36 153 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 TRABD2BA6NFA1 517 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 SLC9B1P1A6NJY1 282 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF729A6NN14 1252 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 WASHC1A8K0Z3 465 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 SNURFLB1AK76 121 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 E5RI56 91 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 G3V3Q6 166 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 M0R296 226 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 AIPO00170 330 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 FPGTO14772 594 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 MYL12BO14950 172 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 UBDO15205 165 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 OGTO15294 1046 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 MSH4O15457 936 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 RGS5O15539 181 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 CHP2O43745 196 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 AIREO43918 545 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 HCN1O60741 890 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 DPM1O60762 260 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 KHDRBS3O75525 346 aaKnown RBP2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 EEDO75530 441 aaKnown RBP2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 WBP4O75554 376 aaKnown RBP2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 GRAP2O75791 330 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 SNAPC5O75971 98 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR4F21O95013 312 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 LSM8O95777 96 aaKnown RBP2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 ANGPTL1O95841 491 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 NDUFB10O96000 172 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 LALBAP00709 142 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 IFNA7P01567 189 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 IFNGP01579 166 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 IL6P05231 212 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 RPLP0P05388 317 aaKnown RBP2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 FABP1P07148 127 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 FGF4P08620 206 aa2.08□□□□□ -2.08
HMGB3P2-201ENST00000411913 HOXC4P09017 264 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms