RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 OR8H1Q8NGG4 311 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR6Q1Q8NGQ2 317 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR2K2Q8NGT1 345 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR9A1PQ8NGU1 263 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 LHFPL5Q8TAF8 219 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 HMGCLL1Q8TB92 370 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 THAP6Q8TBB0 222 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 PNPT1Q8TCS8 783 aaKnown RBP-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 SMCR5Q8TEV8 140 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 DNAAF4Q8WXU2 420 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 LPGAT1Q92604 370 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 KIFAP3Q92845 792 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 C18orf25Q96B23 403 aaPredicted RBP-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 PSMD1Q99460 953 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 S1PR3Q99500 378 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 ARHGDIGQ99819 225 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 DPH7Q9BTV6 452 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 COLEC11Q9BWP8 271 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 CRNKL1Q9BZJ0 848 aaKnown RBP-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC25A51Q9H1U9 297 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 VSIRQ9H7M9 311 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 SCPEP1Q9HB40 452 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 RAVER2Q9HCJ3 691 aaKnown RBP-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 ARFGAP3Q9NP61 516 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 ENTPD7Q9NQZ7 604 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 THG1LQ9NWX6 298 aaKnown RBP-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 DCAF16Q9NXF7 216 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 SAGE1Q9NXZ1 904 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 SEC63Q9UGP8 760 aaKnown RBP-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC12A6Q9UHW9 1150 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 FUT9Q9Y231 359 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 KNSTRNQ9Y448 316 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 MFHAS1Q9Y4C4 1052 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 CLDN16Q9Y5I7 305 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 SCN3AQ9NY46 2000 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 MST1RQ04912 1400 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 BRCA1P38398 1863 aaKnown RBP-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 TRPM7Q96QT4 1865 aa-2.09□□□□□ -2.74
RNU4-88P-201ENST00000411220 KIDINS220Q9ULH0 1771 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PASKQ96RG2 1323 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ATG2AQ2TAZ0 1938 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRAV6A0A075B6T7 132 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FXYD6-FXYD2A0A087WZ82 144 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRAV8-4A0A0B4J246 113 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 A0A1W2PRD5 423 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TUBAL3A6NHL2 446 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TTC36A6NLP5 189 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 C15orf62A8K5M9 175 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 C9JQL5 133 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 NPIPA2E9PIF3 369 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 INS-IGF2F8WCM5 200 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 NPIPA3F8WFD2 350 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 H0YHG0 523 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 H0YIG0 161 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 GABRPO00591 440 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 BPY2O14599 106 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 NDC80O14777 642 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TAAR5O14804 337 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FFAR1O14842 300 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 BCKDKO14874 412 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SMAD7O15105 426 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TEX28O15482 410 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 MBTPS2O43462 519 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 HTRA2O43464 458 aaPredicted RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TCF21O43680 179 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ECE2O60344 883 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 UGT2B11O75310 529 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 CSO75390 466 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TACC1O75410 805 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 B3GALNT1O75752 331 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC25A14O95258 325 aaPredicted RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLU7O95391 586 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC2A10O95528 541 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 P01737 135 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TMEM225BP0DP42 221 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 GHRP10912 638 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 IRF1P10914 325 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 COX7A1P24310 79 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 YWHABP31946 246 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 GPR183P32249 361 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 EVI2BP34910 448 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PRCPP42785 496 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ASMTP46597 345 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR3A2P47893 321 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 IFNAR2P48551 515 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 GATMP50440 423 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 VAMP7P51809 220 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 CRYBA2P53672 197 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PSMD4P55036 377 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 CLDN15P56746 228 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPS23P62266 143 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPS18P62269 152 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ERHP84090 104 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 HMGCS1Q01581 520 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 CALD1Q05682 793 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 NEXNQ0ZGT2 675 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 RALGDSQ12967 914 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRPC3Q13507 836 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SCARB2Q14108 478 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ELOCQ15369 112 aa-2.1□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms