RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 SAMD8Q96LT4 415 aa13.52□□□□□ -0.25
LSM5-207ENST00000410044 ZNF385AQ96PM9 386 aaKnown RBP13.52□□□□□ -0.25
LSM5-207ENST00000410044 RASSF4Q9H2L5 321 aa13.52□□□□□ -0.25
LSM5-207ENST00000410044 EGLN3Q9H6Z9 239 aa13.52□□□□□ -0.25
LSM5-207ENST00000410044 PLSCR4Q9NRQ2 329 aa13.52□□□□□ -0.25
LSM5-207ENST00000410044 PARPBPQ9NWS1 579 aa13.52□□□□□ -0.25
LSM5-207ENST00000410044 ZNF629Q9UEG4 869 aaPredicted RBP13.52□□□□□ -0.25
LSM5-207ENST00000410044 RCE1Q9Y256 329 aa13.52□□□□□ -0.25
LSM5-207ENST00000410044 NCOA6Q14686 2063 aaPredicted RBP13.52□□□□□ -0.25
LSM5-207ENST00000410044 INTS1Q8N201 2190 aaKnown RBP13.52□□□□□ -0.25
LSM5-207ENST00000410044 A0A0G2JNJ9 132 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 A0A1W2PRG6 482 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 E9PQ18 207 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 BHLHE40O14503 412 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 TNFSF13O75888 250 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 ZNF432O94892 652 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 TMIGD3P0DMS9 266 aaPredicted RBP13.51□□□□□ -0.25
LSM5-207ENST00000410044 IGFBP5P24593 272 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 CTSSP25774 331 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 PEX2P28328 305 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 AGTR1P30556 359 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 GIPRP48546 466 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 CRISP1P54107 249 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 POU3F1Q03052 451 aaPredicted RBP13.51□□□□□ -0.25
LSM5-207ENST00000410044 FOXF2Q12947 444 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 ARMC4Q5T2S8 1044 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 GPR139Q6DWJ6 353 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 MTFR2Q6P444 385 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 LNX2Q8N448 690 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 NAXEQ8NCW5 288 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 OR8D4Q8NGM9 314 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 OR6X1Q8NH79 312 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 NRG4Q8WWG1 115 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 RND1Q92730 232 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 TXNDC15Q96J42 360 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 ADAD1Q96M93 576 aaKnown RBP13.51□□□□□ -0.25
LSM5-207ENST00000410044 RDH12Q96NR8 316 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 GABARAPL3Q9BY60 117 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 PLA2G12AQ9BZM1 189 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 Q9UFV3 132 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 SH3BGRL2Q9UJC5 107 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 ZNF346Q9UL40 294 aaKnown RBP13.51□□□□□ -0.25
LSM5-207ENST00000410044 BAIAP2Q9UQB8 552 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 CFAP46Q8IYW2 2715 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 CHD6Q8TD26 2715 aa13.51□□□□□ -0.25
LSM5-207ENST00000410044 RP1L1Q8IWN7 2480 aaPredicted RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 NBASA2RRP1 2371 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 CENPBD1B2RD01 187 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 H0YJX3 145 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 MITFO75030 526 aaPredicted RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 BCL10O95999 233 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 PLGP00747 810 aaPredicted RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 CGAP01215 116 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 IFNGR1P15260 489 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 RPL4P36578 427 aaKnown RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 RPS6KA3P51812 740 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 RAD23AP54725 363 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 PER3P56645 1201 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 RPL27P61353 136 aaKnown RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 NPRL3Q12980 569 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 ACKR1Q16570 336 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 SLC36A3Q495N2 470 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 NUFIP2Q7Z417 695 aaKnown RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 OR52L1Q8NGH7 329 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 OR6K3Q8NGY3 331 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 ASB10Q8WXI3 467 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 STARD4Q96DR4 205 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 LRR1Q96L50 414 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 KATNB1Q9BVA0 655 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 SFXN3Q9BWM7 321 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 TSSK6Q9BXA6 273 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 SLC25A19Q9HC21 320 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 CLEC4AQ9UMR7 237 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 NOSIPQ9Y314 301 aaKnown RBP13.5□□□□□ -0.25
LSM5-207ENST00000410044 EMC9Q9Y3B6 208 aa13.5□□□□□ -0.25
LSM5-207ENST00000410044 SLC35F4A4IF30 521 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 DLGAP1O14490 977 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 LRRTM2O43300 516 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
LSM5-207ENST00000410044 MRPL33O75394 65 aaKnown RBP13.49□□□□□ -0.25
LSM5-207ENST00000410044 SOX14O95416 240 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 CDH2P19022 906 aaPredicted RBP13.49□□□□□ -0.25
LSM5-207ENST00000410044 OPRM1P35372 400 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 OR3A2P47893 321 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
LSM5-207ENST00000410044 CLDN17P56750 224 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 ERVK-25P63136 954 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 PTGES3Q15185 160 aaKnown RBP13.49□□□□□ -0.25
LSM5-207ENST00000410044 LRRC36Q1X8D7 754 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 ZNF362Q5T0B9 420 aaPredicted RBP13.49□□□□□ -0.25
LSM5-207ENST00000410044 FAM205BPQ63HN1 556 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 AAED1Q7RTV5 226 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 HDDC2Q7Z4H3 204 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 IGFN1Q86VF2 1251 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 FJX1Q86VR8 437 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 GCNT2Q8N0V5 402 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 ARIH2OSQ8N7S6 290 aa13.49□□□□□ -0.25
LSM5-207ENST00000410044 OR2T33Q8NG76 320 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms