RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 OR4D1Q15615 310 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 CISD2Q8N5K1 135 aaKnown RBP12□□□□□ -0.49
COL6A3-206ENST00000409809 MTMR14Q8NCE2 650 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 OR51A2Q8NGJ7 313 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 AKR1C1Q04828 323 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 TP53I3Q53FA7 332 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 KIAA0895LQ68EN5 471 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 ALKBH2Q6NS38 261 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 PSMF1Q92530 271 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 SEH1LQ96EE3 360 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 PEBP4Q96S96 227 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 ABHD6Q9BV23 337 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 SLC25A18Q9H1K4 315 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 UCK1Q9HA47 277 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 CNIH4Q9P003 139 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 KLF15Q9UIH9 416 aa12□□□□□ -0.49
COL6A3-206ENST00000409809 GALTP07902 379 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 RRASP10301 218 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZNF85Q03923 595 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CLEC1AQ8NC01 280 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZNRF4Q8WWF5 429 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 WDR76Q9H967 626 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 SH3BGRL2Q9UJC5 107 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZNF814B7Z6K7 855 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 GPR31O00270 319 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CSO75390 466 aaKnown RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 MMP15P51511 669 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 MAP2K6P52564 334 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 SAXO2Q658L1 398 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 TOMM20LQ6UXN7 152 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 DEFB128Q7Z7B8 93 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 MED1Q15648 1581 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CACNA1DQ01668 2161 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 TXNDC12O95881 172 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CDKN2DP55273 166 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 GRB2P62993 217 aaKnown RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZNF776Q68DI1 518 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 DGAT2L6Q6ZPD8 337 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 TAS1R3Q7RTX0 852 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 EMG1Q92979 244 aaKnown RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 HHIPL1Q96JK4 782 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 BCAS3Q9H6U6 928 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CBR1P16152 277 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ARNTP27540 789 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 SCAND1P57086 179 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 UBE2IP63279 158 aaKnown RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 IFI44Q8TCB0 444 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 PRR11Q96HE9 360 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 GPR174Q9BXC1 333 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 A0A1B0GUL6 1792 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZNF318Q5VUA4 2279 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 PIK3C2AO00443 1686 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZNF534Q76KX8 674 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 PDLIM5Q96HC4 596 aaKnown RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 PEX12O00623 359 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 IGHG1P01857 330 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CD52P31358 61 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 IDUAP35475 653 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ERVPABLB-1P60509 514 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CBARPQ8N350 705 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 OR51F2Q8NH61 342 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 LPPQ93052 612 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 FAM3DQ96BQ1 224 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 FBRSQ9HAH7 460 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 SLC17A5Q9NRA2 495 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 GPR173Q9NS66 373 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 RGPD1P0DJD0 1748 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 GPR25O00155 361 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 SLC16A7O60669 478 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 FBP1P09467 338 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 CD99P14209 185 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 UBE2G1P62253 170 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 LCTLQ6UWM7 567 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 LANCL3Q6ZV70 420 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 TMEM106AQ96A25 262 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZMYND19Q96E35 227 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-206ENST00000409809 SLC46A1Q96NT5 459 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 ZNF426Q9BUY5 554 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 RALGAPA1Q6GYQ0 2036 aa11.99□□□□□ -0.49
COL6A3-206ENST00000409809 FAM24AA6NFZ4 105 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 ACOD1A6NK06 481 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 CNMDO75829 334 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 FPR3P25089 353 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 ZNF805Q5CZA5 627 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 COL5A1-AS1Q5SY13 56 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 SYPL2Q5VXT5 272 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 MBOAT2Q6ZWT7 520 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 UCN3Q969E3 161 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 HINT2Q9BX68 163 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 ACP5P13686 325 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 PTGER4P35408 488 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 SRP9P49458 86 aaKnown RBP11.98□□□□□ -0.49
COL6A3-206ENST00000409809 DPPA4Q7L190 304 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 MACROD1Q9BQ69 325 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 JAM3Q9BX67 310 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 GSX1Q9H4S2 264 aaPredicted RBP11.98□□□□□ -0.49
COL6A3-206ENST00000409809 MRPL42Q9Y6G3 142 aaKnown RBP11.98□□□□□ -0.49
COL6A3-206ENST00000409809 GGT5P36269 586 aa11.98□□□□□ -0.49
COL6A3-206ENST00000409809 RPS25P62851 125 aaKnown RBP11.98□□□□□ -0.49
COL6A3-206ENST00000409809 NBPF12Q5TAG4 269 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms