RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 APEHP13798 732 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 SLC2A5P22732 501 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 FKBP2P26885 142 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 GSTT1P30711 240 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 PYCR1P32322 319 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 EIF2S3P41091 472 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 ETV1P50549 477 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TNFSF10P50591 281 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 RPL27P61353 136 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 RAC1P63000 192 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TBCEQ15813 527 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 GPR139Q6DWJ6 353 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TMEM225Q6GV28 225 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 PM20D2Q8IYS1 436 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TMEM251Q8N6I4 163 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 MIB2Q96AX9 1013 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 KLHL15Q96M94 604 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 OR5M11Q96RB7 305 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 CDCA4Q9BXL8 241 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 OR2B2Q9GZK3 357 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 FAM192AQ9GZU8 254 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 RNF32Q9H0A6 362 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 SYT4Q9H2B2 425 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 SLC6A15Q9H2J7 730 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 KLHL13Q9P2N7 655 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TNFRSF10DQ9UBN6 386 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 ERGIC3Q9Y282 383 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 B3GALT5Q9Y2C3 310 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 A0A0J9YW62 118 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 SLC22A31A6NKX4 558 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 NPIPA5E9PKD4 350 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 TXNDC12O95881 172 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 SPI1P17947 270 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 MYL12AP19105 171 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 POU3F2P20265 443 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-204ENST00000409727 CLK1P49759 484 aaKnown RBP11.16□□□□□ -0.62
CHMP3-204ENST00000409727 PPIAP62937 165 aaKnown RBP11.16□□□□□ -0.62
CHMP3-204ENST00000409727 SLC35A1P78382 337 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 HSF1Q00613 529 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 PMP22Q01453 160 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 RUNX1T1Q06455 604 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 IRF3Q14653 427 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 EMC4Q5J8M3 183 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 LYPD4Q6UWN0 246 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 LHFPL3Q86UP9 236 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 SPACA3Q8IXA5 215 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 ARIH2OSQ8N7S6 290 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 OR13F1Q8NGS4 319 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 TXNDC15Q96J42 360 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 DDOQ99489 341 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 NAA50Q9GZZ1 169 aaKnown RBP11.16□□□□□ -0.62
CHMP3-204ENST00000409727 NPIPA1Q9UND3 350 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 DIMT1Q9UNQ2 313 aaKnown RBP11.16□□□□□ -0.62
CHMP3-204ENST00000409727 CEPT1Q9Y6K0 416 aa11.16□□□□□ -0.62
CHMP3-204ENST00000409727 IRGMA1A4Y4 181 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 GJE1A6NN92 205 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 M0R3G1 203 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 DCTN6O00399 190 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 MYL12BO14950 172 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 SEC14L2O76054 403 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 PMS2P2O95744 297 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 BCL10O95999 233 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 RENP00797 406 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 DCKP27707 260 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 SUCLG1P53597 346 aaKnown RBP11.15□□□□□ -0.62
CHMP3-204ENST00000409727 SRYQ05066 204 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.62
CHMP3-204ENST00000409727 PON3Q15166 354 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 B3GNT6Q6ZMB0 384 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 SLC35D2Q76EJ3 337 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 WDFY1Q8IWB7 410 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 SYT14Q8NB59 555 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 PROKR2Q8NFJ6 384 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 OR10H4Q8NGA5 316 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 ZNF519Q8TB69 540 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 SCMH1Q96GD3 660 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 FOXN4Q96NZ1 517 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 UCN2Q96RP3 112 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 TUBA1CQ9BQE3 449 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 EMC6Q9BV81 110 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
CHMP3-204ENST00000409727 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
CHMP3-204ENST00000409727 CHCHD3Q9NX63 227 aaKnown RBP11.15□□□□□ -0.62
CHMP3-204ENST00000409727 B3GAT1Q9P2W7 334 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 TRAPPC4Q9Y296 219 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
CHMP3-204ENST00000409727 GLSO94925 669 aaPredicted RBP11.15□□□□□ -0.63
CHMP3-204ENST00000409727 ITGB2P05107 769 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 HPNP05981 417 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 NR4A1P22736 598 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 CD79BP40259 229 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 NAA10P41227 235 aaPredicted RBP11.15□□□□□ -0.63
CHMP3-204ENST00000409727 EIF1AXP47813 144 aaKnown RBP11.15□□□□□ -0.63
CHMP3-204ENST00000409727 CENPAP49450 140 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 P2RY4P51582 365 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 HCCSP53701 268 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 BIDP55957 195 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms