RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NT5C3BQ969T7 300 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 UPRTQ96BW1 309 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 RNF170Q96K19 258 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PHF7Q9BWX1 381 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 MBNL1Q9NR56 388 aaKnown RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SLC6A5Q9Y345 797 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 MSTNO14793 375 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 FANCGO15287 622 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 GPR37O15354 613 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 XRCC3O43542 346 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 MMP2P08253 660 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 PIGWQ7Z7B1 504 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 UMODL1-AS1Q8N2C9 162 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 OR51H1Q8NH63 302 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF582Q96NG8 517 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 F5H5P2 479 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 DPM1O60762 260 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 BCKDHBP21953 392 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 LTBQ06643 244 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 MON2Q7Z3U7 1717 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 CD200R1Q8TD46 325 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SEC22AQ96IW7 307 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 PDLIM7Q9NR12 457 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TMED7-TICAM2A0A0A6YYA0 188 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 NOTOA8MTQ0 251 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ABCD4O14678 606 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 GLRA1P23415 457 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SLC19A1P41440 591 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ACTBP60709 375 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 GRB2P62993 217 aaKnown RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ACTG1P63261 375 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 HIST2H3PS2Q5TEC6 136 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TUBA3EQ6PEY2 450 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 POPDC3Q9HBV1 291 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TMED7Q9Y3B3 224 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SPATA31D1Q6ZQQ2 1576 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 FAM221AA4D161 298 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SLC22A2O15244 555 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SCGB1D1O95968 90 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 BMP5P22003 454 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 HIST1H1TP22492 207 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 RACK1P63244 317 aaKnown RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 C14orf28Q4W4Y0 310 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 CCL4L1Q8NHW4 92 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 RASD2Q96D21 266 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TVP23CQ96ET8 276 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TMEM208Q9BTX3 173 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TMEM59LQ9UK28 342 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 EEDO75530 441 aaKnown RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TAGLNQ01995 201 aaKnown RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 RTP5Q14D33 572 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF480Q8WV37 535 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TMEM43Q9BTV4 400 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 CCM2LQ9NUG4 571 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 KNL1Q8NG31 2342 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SDHDO14521 159 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SNRNP70P08621 437 aaKnown RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SLC35A1P78382 337 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 C9orf50Q5SZB4 431 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 S100A7AQ86SG5 101 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ACPTQ9BZG2 426 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ZDHHC18Q9NUE0 388 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 PRAMEF25A6NGN4 478 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 NPPAP01160 153 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 OR5G3P0C626 314 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 METAP1DQ6UB28 335 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 DBX2Q6ZNG2 339 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 DVL3Q92997 716 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SLC5A6Q9Y289 635 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 ABCC6O95255 1503 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 FUOMA2VDF0 154 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 OSMP13725 252 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 PCSK6P29122 969 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 GIPRP48546 466 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 HCCSP53701 268 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 OR5I1Q13606 314 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TUBA3CQ13748 450 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 THSD4Q6ZMP0 1018 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 SIMC1Q8NDZ2 872 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 OR10G3Q8NGC4 313 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 OR13C9Q8NGT0 318 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 UHRF2Q96PU4 802 aa7.78□□□□□ -1.16
SCN9A-203ENST00000409672 TUBA8Q9NY65 449 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-203ENST00000409672 HLA-AP01891 365 aaKnown RBP7.77□□□□□ -1.16
SCN9A-203ENST00000409672 S100A7P31151 101 aa7.77□□□□□ -1.16
SCN9A-203ENST00000409672 MARCH8Q5T0T0 291 aa7.77□□□□□ -1.16
SCN9A-203ENST00000409672 ASTLQ6HA08 431 aaPredicted RBP7.77□□□□□ -1.16
SCN9A-203ENST00000409672 FAM199XQ6PEV8 388 aaPredicted RBP7.77□□□□□ -1.16
SCN9A-203ENST00000409672 C11orf42Q8N5U0 333 aa7.77□□□□□ -1.16
SCN9A-203ENST00000409672 CNTNAP3BQ96NU0 1288 aa7.77□□□□□ -1.16
SCN9A-203ENST00000409672 FAM157AC9JC47 383 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
SCN9A-203ENST00000409672 ARPC1BO15143 372 aaKnown RBP7.77□□□□□ -1.17
SCN9A-203ENST00000409672 NUPL2O15504 423 aaKnown RBP7.77□□□□□ -1.17
SCN9A-203ENST00000409672 GALR3O60755 368 aaPredicted RBP7.77□□□□□ -1.17
SCN9A-203ENST00000409672 IL10RAQ13651 578 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 CTC1Q2NKJ3 1217 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SMUG1Q53HV7 270 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms