RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SLC25A1P53007 311 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 OR2B6P58173 313 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 MFAP5Q13361 173 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 GGTLC2Q14390 218 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 SPHARQ15513 63 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 OR2G6Q5TZ20 316 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 LHFPL3Q86UP9 236 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 SULF2Q8IWU5 870 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 ARIH2OSQ8N7S6 290 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 FAM83FQ8NEG4 500 aaPredicted RBP12.62□□□□□ -0.39
GPNMB-203ENST00000409458 OR14L1PQ8NHC6 308 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 RAB2BQ8WUD1 216 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 SMPDL3BQ92485 455 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 OPALINQ96PE5 141 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 TSSK2Q96PF2 358 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 TBX5Q99593 518 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 MGLLQ99685 303 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 OR2B2Q9GZK3 357 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 ZNF552Q9H707 407 aaPredicted RBP12.62□□□□□ -0.39
GPNMB-203ENST00000409458 HAO2Q9NYQ3 351 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 POLHQ9Y253 713 aa12.62□□□□□ -0.39
GPNMB-203ENST00000409458 MED12Q93074 2177 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 A0A1W2PRG6 482 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 C12orf71A8MTZ7 269 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ZNF814B7Z6K7 855 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ARHGEF9O43307 516 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 GABARAPO95166 117 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ATE1O95260 518 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 SBK2P0C263 348 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 GDF1P27539 372 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 PCSK6P29122 969 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 PYCR1P32322 319 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 RFC3P40938 356 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 TSTQ16762 297 aaKnown RBP12.61□□□□□ -0.39
GPNMB-203ENST00000409458 SLC35D3Q5M8T2 416 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 LCN1P1Q5VSP4 162 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 LYPD4Q6UWN0 246 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ADCK1Q86TW2 530 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 P2RY8Q86VZ1 359 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 WDFY1Q8IWB7 410 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ADPRHL1Q8NDY3 354 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 SMAP2Q8WU79 429 aaPredicted RBP12.61□□□□□ -0.39
GPNMB-203ENST00000409458 MIB2Q96AX9 1013 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ZNF703Q9H7S9 590 aaPredicted RBP12.61□□□□□ -0.39
GPNMB-203ENST00000409458 FANCFQ9NPI8 374 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 CHCHD3Q9NX63 227 aaKnown RBP12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ERVK13-1Q9NX77 482 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 B3GAT1Q9P2W7 334 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 B3GALT5Q9Y2C3 310 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ZFHX4Q86UP3 3567 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 FREM3P0C091 2139 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 FAM171A2A8MVW0 826 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 DCTN6O00399 190 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 XKRYO14609 159 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 NME2P1O60361 137 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 RENP00797 406 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 TFP02787 698 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 KLK2P20151 261 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 NME2P22392 152 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 DIO1P49895 249 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 CCL11P51671 97 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 WNT4P56705 351 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 POU3F1Q03052 451 aaPredicted RBP12.61□□□□□ -0.39
GPNMB-203ENST00000409458 LGALS3BPQ08380 585 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 POU4F2Q12837 409 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 AQP6Q13520 282 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 C1DQ13901 141 aaKnown RBP12.61□□□□□ -0.39
GPNMB-203ENST00000409458 PON3Q15166 354 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 CTF1Q16619 201 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 WIPI1Q5MNZ9 446 aaPredicted RBP12.61□□□□□ -0.39
GPNMB-203ENST00000409458 LINC01590Q5TEZ4 76 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 TMPPEQ6ZT21 453 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ZNF485Q8NCK3 441 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 FDCSPQ8NFU4 85 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 OR10H4Q8NGA5 316 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 OR6K6Q8NGW6 343 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 ASB10Q8WXI3 467 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 PTTG2Q9NZH5 202 aa12.61□□□□□ -0.39
GPNMB-203ENST00000409458 PTPRZ1P23471 2315 aaPredicted RBP12.6□□□□□ -0.39
GPNMB-203ENST00000409458 KIAA1549Q9HCM3 1950 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 SULT2B1O00204 365 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 CDK2AP1O14519 115 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 SELENOFO60613 162 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 TRAPPC6AO75865 159 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 GLCEO94923 617 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 PMS2P2O95744 297 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 SCG5P05408 212 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 SP1P08047 785 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 IFNGR1P15260 489 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 NAA10P41227 235 aaPredicted RBP12.6□□□□□ -0.39
GPNMB-203ENST00000409458 RGS6P49758 472 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 RAC1P63000 192 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 ARG2P78540 354 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 HSF1Q00613 529 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 RUNX1T1Q06455 604 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 SSX1Q16384 188 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 DEFB109BQ30KR1 87 aa12.6□□□□□ -0.39
GPNMB-203ENST00000409458 CRTC2Q53ET0 693 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms