RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 PLGP00747 810 aaPredicted RBP22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 CFL1P23528 166 aaKnown RBP22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 MYL9P24844 172 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 SHC1P29353 583 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 GDI2P50395 445 aaKnown RBP22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 DLX5P56178 289 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 ACKR1Q16570 336 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 CCDC58Q4VC31 144 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 ACSM3Q53FZ2 586 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 EEF1A1P5Q5VTE0 462 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 FAM131AQ6UXB0 335 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 OR2Y1Q8NGV0 311 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 SNRNP27Q8WVK2 155 aaKnown RBP22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 PPP1R14BQ96C90 147 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 DDIT4LQ96D03 193 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 NPAS1Q99742 590 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 RNF32Q9H0A6 362 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 SYT4Q9H2B2 425 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 TXNIPQ9H3M7 391 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 PCDHGA5Q9Y5G8 931 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 WIF1Q9Y5W5 379 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 FUOMA2VDF0 154 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 PTGDSP41222 190 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 BCAP31P51572 246 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 DEFA1P59665 94 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 DEFA3P59666 94 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 FOXF1Q12946 379 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 MFSD13AQ14CX5 517 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 DCAF12Q5T6F0 453 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 ZNF517Q6ZMY9 492 aaPredicted RBP22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 PM20D2Q8IYS1 436 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 SMIM19Q96E16 107 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 CCDC86Q9H6F5 360 aaKnown RBP22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 SP140LQ9H930 580 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 ACOXLQ9NUZ1 547 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 B3GALT1Q9Y5Z6 326 aa22.27■■□□□ 1.16
DNMT3A-206ENST00000406659 IGLV3-32A0A0A0MS00 114 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 TRBV2A0A0J9YWF9 115 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 FABP12A6NFH5 140 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 COX6A1P12074 109 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 FOLR3P41439 243 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 CCDC157Q569K6 752 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 PAMR1Q6UXH9 720 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 TIGD4Q8IY51 512 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 ZNF248Q8NDW4 579 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 ZNF519Q8TB69 540 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 IMMP1LQ96LU5 166 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 HS3ST3B1Q9Y662 390 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 SPEGQ15772 3267 aa22.26■■□□□ 1.15
DNMT3A-206ENST00000406659 TVP23AA6NH52 213 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 FTCDNL1E5RQL4 147 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 TP53I11O14683 189 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 ZNF208O43345 1280 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 CD1AP06126 327 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 TFPIP10646 304 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 PSMB10P40306 273 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 CASP3P42574 277 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 KCTD20Q7Z5Y7 419 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 PXKQ7Z7A4 578 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 TPRA1Q86W33 373 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 MFSD8Q8NHS3 518 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 M1APQ8TC57 530 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 SNX18Q96RF0 628 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 PPIL3Q9H2H8 161 aaKnown RBP22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 C14orf119Q9NWQ9 140 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 HRH3Q9Y5N1 445 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 LNP1A1A4G5 178 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 PRSS37A4D1T9 235 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 ITGA10O75578 1167 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 SC5DO75845 299 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 DKK1O94907 266 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 CELA2AP08217 269 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 TACSTD2P09758 323 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 OR7A5Q15622 319 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 FAM27D1Q5T7N8 215 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 XKRXQ6PP77 449 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 CDC20BQ86Y33 519 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 TEX19Q8NA77 164 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 MRGPRX4Q96LA9 322 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 MNTQ99583 582 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 STRADBQ9C0K7 418 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 LOXL2Q9Y4K0 774 aa22.25■■□□□ 1.15
DNMT3A-206ENST00000406659 ETV2O00321 342 aaPredicted RBP22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 IGHMP01871 453 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 AVPR2P30518 371 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 ZNF79Q15937 498 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 SLC25A53Q5H9E4 307 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 ZMAT1Q5H9K5 638 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 FAM220AQ7Z4H9 259 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 OR13C5Q8NGS8 318 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 ACOT12Q8WYK0 555 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 ARL5BQ96KC2 179 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 KLHL15Q96M94 604 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 SRRQ9GZT4 340 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 LAMP5Q9UJQ1 280 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 FKBP7Q9Y680 259 aa22.24■■□□□ 1.15
DNMT3A-206ENST00000406659 FAM47E-STBD1D6RA91 191 aa22.23■■□□□ 1.15
DNMT3A-206ENST00000406659 PSMD9O00233 223 aa22.23■■□□□ 1.15
DNMT3A-206ENST00000406659 MAP2K6P52564 334 aa22.23■■□□□ 1.15
DNMT3A-206ENST00000406659 CDC20Q12834 499 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms