RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ARPC3O15145 178 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 RAMP1O60894 148 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 INMTO95050 263 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 BCL10O95999 233 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ITGB2P05107 769 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 CDK1P06493 297 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 HSMCR30P0CW71 290 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ENPP1P22413 925 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 FKBP2P26885 142 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 PSMB9P28065 219 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 CARD18P57730 90 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 B3GALT5-AS1P59052 145 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SLC35A1P78382 337 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 HSF1Q00613 529 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TEKQ02763 1124 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MS4A18Q3C1V0 323 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MESTQ5EB52 335 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 RNFT1Q5M7Z0 435 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SLC25A30Q5SVS4 291 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 HBMQ6B0K9 141 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 LRRC69Q6ZNQ3 347 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 PRSS48Q7RTY5 328 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 FAM122BQ7Z309 247 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 GPR141Q7Z602 305 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 GID4Q8IVV7 300 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 PM20D2Q8IYS1 436 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SLC43A2Q8N370 569 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SCAIQ8N9R8 606 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 NPEPL1Q8NDH3 523 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 PROKR2Q8NFJ6 384 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 RORBQ92753 470 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MIB2Q96AX9 1013 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZNF775Q96BV0 537 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 LGALS12Q96DT0 336 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZMYND19Q96E35 227 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 TXNDC15Q96J42 360 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 FOXN4Q96NZ1 517 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 UCN2Q96RP3 112 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 GPX7Q96SL4 187 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 RNF32Q9H0A6 362 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ASB6Q9NWX5 421 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 LUZP4Q9P127 313 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 WARS2Q9UGM6 360 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 CLEC2DQ9UHP7 191 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 KLHL21Q9UJP4 597 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 B3GALT5Q9Y2C3 310 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 CPAMD8Q8IZJ3 1885 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ACOT7O00154 380 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TFECO14948 347 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 IDH3BO43837 385 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CXCL13O43927 109 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 LCKP06239 509 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ADRA2AP08913 450 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZNF24P17028 368 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZNF43P17038 809 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 MYL12AP19105 171 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 HTR1FP30939 366 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PYCR1P32322 319 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CLK1P49759 484 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 SUCLG1P53597 346 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 RPL27P61353 136 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 CSNK2A1P68400 391 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 RUNX1T1Q06455 604 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 RAB39AQ14964 217 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SLC10A1Q14973 349 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PON3Q15166 354 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 MED22Q15528 200 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TMEM44Q2T9K0 475 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 KLHL22Q53GT1 634 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 EEF1A1P5Q5VTE0 462 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 OTPQ5XKR4 325 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CARD17Q5XLA6 110 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 XAF1Q6GPH4 301 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 NIPAL3Q6P499 406 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PAQR6Q6TCH4 344 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 LYPD4Q6UWN0 246 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PLXDC2Q6UX71 529 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SLC35D2Q76EJ3 337 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 MEPCEQ7L2J0 689 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 LHFPL3Q86UP9 236 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 UEVLDQ8IX04 471 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SVOPQ8N4V2 548 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ARIH2OSQ8N7S6 290 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZFP62Q8NB50 900 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 OR52I1Q8NGK6 324 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 OR10D3Q8NH80 312 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TM9SF4Q92544 642 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 EXTL1Q92935 676 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 DTNBP1Q96EV8 351 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SCMH1Q96GD3 660 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TMEM80Q96HE8 168 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TEAD3Q99594 435 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 OR2B2Q9GZK3 357 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TXNIPQ9H3M7 391 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CHCHD3Q9NX63 227 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 CNOT2Q9NZN8 540 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 ERGIC3Q9Y282 383 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 NCKAP5O14513 1909 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SLC22A31A6NKX4 558 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms