RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SLC31A1O15431 190 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 NIPSNAP2O75323 286 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 BCAS2O75934 225 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 RHOBTB1O94844 696 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 KLHL2O95198 593 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 IGHV3-13P01766 116 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 FTH1P02794 183 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 PCCBP05166 539 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 SFTPBP07988 381 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 MPC1LP0DKB6 136 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 SHC1P29353 583 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 RABIFP47224 123 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 RGS4P49798 205 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 KPNA2P52292 529 aaKnown RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ATP6V0D1P61421 351 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 COX10Q12887 443 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 FAM83EQ2M2I3 478 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CCDC153Q494R4 210 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF658BQ4V348 819 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 KCTD16Q68DU8 428 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 PTRHD1Q6GMV3 140 aaKnown RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 RTL6Q6ICC9 239 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM220Q6QAJ8 160 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 KDM7AQ6ZMT4 941 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF841Q6ZN19 808 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 GCNT7Q6ZNI0 430 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 NUFIP2Q7Z417 695 aaKnown RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 RABEPKQ7Z6M1 372 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CMC1Q7Z7K0 106 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 MYPOPQ86VE0 399 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CCDC71Q8IV32 467 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CENPLQ8N0S6 344 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 KRT222Q8N1A0 295 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 C4orf33Q8N1A6 199 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CLDN19Q8N6F1 224 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM105Q8N8V8 129 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CHDHQ8NE62 594 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 C17orf47Q8NEP4 570 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR1B1Q8NGR6 318 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 RHEBL1Q8TAI7 183 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 RDH11Q8TC12 318 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CD200R1Q8TD46 325 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ASZ1Q8WWH4 475 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 PNPLA2Q96AD5 504 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLCO4A1Q96BD0 722 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 BIRC7Q96CA5 298 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ELMO2Q96JJ3 720 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 SERAC1Q96JX3 654 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 GPR137Q96N19 417 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 TSNARE1Q96NA8 513 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ANKRD27Q96NW4 1050 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 GPR21Q99679 349 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 IQCGQ9H095 443 aaKnown RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ADNPQ9H2P0 1102 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 NMRAL1Q9HBL8 299 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ATXN10Q9UBB4 475 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC17A4Q9Y2C5 497 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 PLLPQ9Y342 182 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 FBXO7Q9Y3I1 522 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 AUP1Q9Y679 476 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 A0A0C4DFX4 3053 aa3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 ASCC3Q8N3C0 2202 aaKnown RBP3.96□□□□□ -1.78
HMGB3P19-201ENST00000403971 CROCCQ5TZA2 2017 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 USP34Q70CQ2 3546 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 SEC16AO15027 2179 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 SPTY2D1-AS1A0A0U1RR47 76 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TEX48A0A1B0GUV7 120 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC5A10A0PJK1 596 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 MGAT4DA6NG13 374 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 ACOD1A6NK06 481 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 GOLGA8RI6L899 631 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 KMOO15229 486 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 BIRC5O15392 142 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 PLIN3O60664 434 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TRIM16O95361 564 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 BAG2O95816 211 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TSPAN12O95859 305 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 IGHG1P01857 330 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 RBP1P09455 135 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR9G9P0C7N8 305 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 CCDC166P0CW27 439 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 MAT2AP31153 395 aaKnown RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 CCR7P32248 378 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 RPA3P35244 121 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC1A6P48664 564 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 HNRNPFP52597 415 aaKnown RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 RIDAP52758 137 aaKnown RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 CDKN2DP55273 166 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 SRP54P61011 504 aaKnown RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 NAA20P61599 178 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 FASTKQ14296 549 aaKnown RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 EXOSC7Q15024 291 aaKnown RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 GPAT3Q53EU6 434 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 PYCR3Q53H96 274 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM31Q5JXX7 168 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 CDKL4Q5MAI5 379 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 C9orf66Q5T8R8 295 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 ETFRF1Q6IPR1 90 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms