RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 OMPP47874 163 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 PRPS1P60891 318 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 GK3PQ14409 553 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 NHLRC1Q6VVB1 395 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 SLC35D2Q76EJ3 337 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 MEX3DQ86XN8 651 aaKnown RBP12.1□□□□□ -0.47
VPREB1-202ENST00000403807 STEAP2Q8NFT2 490 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 OR51A7Q8NH64 312 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
VPREB1-202ENST00000403807 FAM46AQ96IP4 442 aaKnown RBP12.1□□□□□ -0.47
VPREB1-202ENST00000403807 ADAD1Q96M93 576 aaKnown RBP12.1□□□□□ -0.47
VPREB1-202ENST00000403807 DACH2Q96NX9 599 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 TNFRSF13CQ96RJ3 184 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 USB1Q9BQ65 265 aaKnown RBP12.1□□□□□ -0.47
VPREB1-202ENST00000403807 EMC6Q9BV81 110 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 NDEL1Q9GZM8 345 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 SLC7A10Q9NS82 523 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 MED29Q9NX70 200 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 KCNN3Q9UGI6 736 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 LYVE1Q9Y5Y7 322 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 CACNA1CQ13936 2221 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 HCFC1P51610 2035 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 CIB4A0PJX0 185 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 CDC42EP2O14613 210 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 CASKO14936 926 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 CLOCKO15516 846 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 FKBP6O75344 327 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 F13BP05160 661 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 EPXP11678 715 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 IGHV1-2P23083 117 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 GPR4P46093 362 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 LIMS1P48059 325 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 ERFP50548 548 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 BIDP55957 195 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 TGFBR3Q03167 851 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 GABPB1Q06547 395 aaPredicted RBP12.09□□□□□ -0.47
VPREB1-202ENST00000403807 ALG10Q5BKT4 473 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 ANKRD34AQ69YU3 496 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 GPR137CQ8N3F9 429 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 ZNF433Q8N7K0 673 aaPredicted RBP12.09□□□□□ -0.47
VPREB1-202ENST00000403807 PAPD5Q8NDF8 572 aaKnown RBP12.09□□□□□ -0.47
VPREB1-202ENST00000403807 OR6X1Q8NH79 312 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 MOSPD2Q8NHP6 518 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 GNPDA2Q8TDQ7 276 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 UTP4Q969X6 686 aaKnown RBP12.09□□□□□ -0.47
VPREB1-202ENST00000403807 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 LRR1Q96L50 414 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 WFIKKN1Q96NZ8 548 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 RAB3IPQ96QF0 476 aaPredicted RBP12.09□□□□□ -0.47
VPREB1-202ENST00000403807 OR2M2Q96R28 347 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 MED18Q9BUE0 208 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 MCCC2Q9HCC0 563 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 TAS2R16Q9NYV7 291 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 CRIM1Q9NZV1 1036 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 MALT1Q9UDY8 824 aa12.09□□□□□ -0.47
VPREB1-202ENST00000403807 SAMHD1Q9Y3Z3 626 aaKnown RBP12.09□□□□□ -0.47
VPREB1-202ENST00000403807 SPTAN1Q13813 2472 aaKnown RBP12.08□□□□□ -0.48
VPREB1-202ENST00000403807 TRAV27A0A087WT01 109 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 SH3D21A4FU49 640 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 UNC119BA6NIH7 251 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 MCIDASD6RGH6 385 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF587BE7ETH6 402 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 PTP4A3O75365 173 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 UPK3AO75631 287 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 LYZL6O75951 148 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 CCNB2O95067 398 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 MPGP29372 298 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 DNAJA1P31689 397 aaKnown RBP12.08□□□□□ -0.48
VPREB1-202ENST00000403807 DAP3P51398 398 aaKnown RBP12.08□□□□□ -0.48
VPREB1-202ENST00000403807 CTXN1P60606 82 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 RPS4XP62701 263 aaKnown RBP12.08□□□□□ -0.48
VPREB1-202ENST00000403807 CAMK2DQ13557 499 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 MICAQ29983 383 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 CARD17Q5XLA6 110 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF787Q6DD87 383 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 OR7E24Q6IFN5 339 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 HMBOX1Q6NT76 420 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 C1orf94Q6P1W5 598 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 BHLHA15Q7RTS1 189 aaPredicted RBP12.08□□□□□ -0.48
VPREB1-202ENST00000403807 HDDC2Q7Z4H3 204 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 C10orf67Q8IYJ2 551 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 OR4C15Q8NGM1 316 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 OR13C2Q8NGS9 318 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 OR6N1Q8NGY5 312 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 HSD17B8Q92506 261 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 SLCO4A1Q96BD0 722 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
VPREB1-202ENST00000403807 ACTR6Q9GZN1 396 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 TXNIPQ9H3M7 391 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 B3GAT2Q9NPZ5 323 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF226Q9NYT6 803 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 STX18Q9P2W9 335 aaKnown RBP12.08□□□□□ -0.48
VPREB1-202ENST00000403807 U3KQV3 271 aa12.08□□□□□ -0.48
VPREB1-202ENST00000403807 NPIPB13A6NJU9 1138 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 NPIPB4C9JG80 1138 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms