RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CISD1Q9NZ45 108 aaKnown RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SELENONQ9NZV5 590 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 PRDM4Q9UKN5 801 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 RASD1Q9Y272 281 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 MAGED1Q9Y5V3 778 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ABCA1O95477 2261 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 RTTNQ86VV8 2226 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 BBIP1A8MTZ0 92 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 E7EQL1 145 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 C11orf98E9PRG8 122 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 MS4A18H0YCH9 400 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 H7C1Q1 480 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 M0R3G1 203 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 TRAF3IP2O43734 574 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 CHP2O43745 196 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR2T1O43869 369 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 FMO6PO60774 539 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 FZD7O75084 574 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 NDUFS7O75251 213 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF432O94892 652 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ALX3O95076 343 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 VAMP5O95183 116 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 CH25HO95992 272 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 CD8AP01732 235 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 C8BP07358 591 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 COX4I1P13073 169 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 NQO1P15559 274 aaKnown RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 CD40P25942 277 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR1E2P47887 323 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 SEC24CP53992 1094 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 GYS2P54840 703 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 RPS4XP62701 263 aaKnown RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARF1P84077 181 aaKnown RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ROR2Q01974 943 aaKnown RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 POU3F1Q03052 451 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 PMS2P3Q13401 168 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 MAPRE2Q15555 327 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 MS4A18Q3C1V0 323 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 TBRG1Q3YBR2 411 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 LRRC23Q53EV4 343 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 COQ5Q5HYK3 327 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 PHYHD1Q5SRE7 291 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 INTS11Q5TA45 600 aaKnown RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 SHEQ5VZ18 495 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR7E24Q6IFN5 339 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF613Q6PF04 617 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC22A25Q6T423 547 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 KLHL17Q6TDP4 642 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 C5orf46Q6UWT4 87 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM108Q6UXF1 575 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 DEF8Q6ZN54 512 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 H1FNTQ75WM6 255 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 CCDC80Q76M96 950 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 P2RY8Q86VZ1 359 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 CARM1Q86X55 608 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 UEVLDQ8IX04 471 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM123Q8N131 208 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 LRRC17Q8N6Y2 441 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 BHLHE22Q8NFJ8 381 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR8J3Q8NGG0 315 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR1K1Q8NGR3 316 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ADAMTS16Q8TE57 1224 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 HTRA1Q92743 480 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 BCL2L2Q92843 193 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC41A3Q96GZ6 507 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 TXNDC15Q96J42 360 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 RADILQ96JH8 1075 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 C18orf12Q96KH6 178 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 OXGR1Q96P68 337 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR2M2Q96R28 347 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 EPYCQ99645 322 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ELAC2Q9BQ52 826 aaKnown RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 PRSS27Q9BQR3 290 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM43Q9BTV4 400 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 FAM107BQ9H098 131 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 NELFAQ9H3P2 528 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 SEC61A2Q9H9S3 476 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF701Q9NV72 531 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 CMTM6Q9NX76 183 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 POU2F3Q9UKI9 436 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC7A7Q9UM01 511 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 AMDHD2Q9Y303 409 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 SH3GLB1Q9Y371 365 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ATP23Q9Y6H3 246 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARFGEF3Q5TH69 2177 aa5.04□□□□□ -1.6
HMGB1P20-201ENST00000402555 TRAPPC13A5PLN9 417 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF503-AS2A6NEH8 195 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 FAM220BPB1ANY3 271 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 ATP6V1G2-DDX39BF2Z307 99 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 OVOL3O00110 214 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 PLPP3O14495 311 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC43A1O75387 559 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 IGHV4-39P01824 125 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 CELA3BP08861 270 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 INHBBP09529 407 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 ADORA3P0DMS8 318 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 FUT4P22083 530 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 AHCYP23526 432 aa5.03□□□□□ -1.6
HMGB1P20-201ENST00000402555 PTAFRP25105 342 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms