RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CCDC58Q4VC31 144 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 CD276Q5ZPR3 534 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR2A2Q6IF42 318 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 FBXO42Q6P3S6 717 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 HACD2Q6Y1H2 254 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TPRG1Q6ZUI0 275 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 STK40Q8N2I9 435 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 DTX3Q8N9I9 347 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR1L4Q8NGR5 311 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR10J5Q8NHC4 309 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 UBASH3BQ8TF42 649 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 GLYATL1Q969I3 302 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 SMIM10Q96HG1 83 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 PPP3R2Q96LZ3 170 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 DUSP15Q9H1R2 295 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 RNF167Q9H6Y7 350 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 UBTD1Q9HAC8 227 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 EIF3KQ9UBQ5 218 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 WIF1Q9Y5W5 379 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 A0A087WXM4 84 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 A0A0J9YVX5 310 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 NTN1O95631 604 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CPNE6O95741 557 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 EFEMP2O95967 443 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 LINC00271P0C7V0 271 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 OCMP0CE72 109 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CDH1P12830 882 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 ETFAP13804 333 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 ATP1B2P14415 290 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 DCTP40126 519 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 NSG1P42857 185 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 IDH2P48735 452 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CLDN2P57739 230 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 NAA20P61599 178 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 FRG2Q64ET8 278 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 NOXRED1Q6NXP6 359 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 KCNIP4Q6PIL6 250 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 TMEM156Q8N614 296 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 NEIL2Q969S2 332 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 SCRN2Q96FV2 425 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 FRG2BQ96QU4 278 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 MDFIQ99750 246 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 TPSD1Q9BZJ3 242 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 SRRQ9GZT4 340 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 ABCB10Q9NRK6 738 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 TAS2R9Q9NYW1 312 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 NLKQ9UBE8 527 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 FLVCR2Q9UPI3 526 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 PNMA8CA0A1B0GUJ8 204 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 RNF222A6NCQ9 220 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CLIC1O00299 241 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CRYZL1O95825 349 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CBX7O95931 251 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 RPN2P04844 631 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR56A5P0C7T3 313 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 RAP2AP10114 183 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 VPREB1P12018 145 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 KIR3DL1P43629 444 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 PFN3P60673 137 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 SLC3A1Q07837 685 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 FOXE3Q13461 319 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 AQP6Q13520 282 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 TAF13Q15543 124 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 TTLL9Q3SXZ7 439 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 TMEM35AQ53FP2 167 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZNF385BQ569K4 471 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 LAIR2Q6ISS4 152 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 H3F3CQ6NXT2 135 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 GDPD4Q6W3E5 623 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 AHSA2Q719I0 299 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 PGAP1Q75T13 922 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 PRSS45Q7RTY3 260 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 ADGRE4PQ86SQ3 457 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 THOC6Q86W42 341 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 RIMKLAQ8IXN7 391 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CLIP4Q8N3C7 705 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 HORMAD2Q8N7B1 307 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 BOLLQ8N9W6 283 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 VN1R2Q8NFZ6 395 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 UBTD2Q8WUN7 234 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 MSI2Q96DH6 328 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 RSPRY1Q96DX4 576 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 VPS35Q96QK1 796 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 PRRT1Q99946 306 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 SLC30A2Q9BRI3 323 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 LMF2Q9BU23 707 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 KAT8Q9H7Z6 458 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 DNAJC4Q9NNZ3 241 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 SEMA4GQ9NTN9 838 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 SLC25A13Q9UJS0 675 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 ERVW-1Q9UQF0 538 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 SCN3AQ9NY46 2000 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CCSO14618 274 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 LCKP06239 509 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 FCGR1AP12314 374 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 DTYMKP23919 212 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 HTR1EP28566 365 aa5.63□□□□□ -1.51
TRAPPC13-202ENST00000399438 CDK9P50750 372 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms