RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 H7C1C5 153 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 OR2A4O95047 310 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 B2MP61769 119 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 LCN6P62502 163 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 FLI1Q01543 452 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 OR7A5Q15622 319 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 DEFB115Q30KQ5 88 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 HSD17B13Q7Z5P4 300 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 NKD1Q969G9 470 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF558Q96NG5 402 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 OR2A7Q96R45 310 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 IFT22Q9H7X7 185 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TMEM27Q9HBJ8 222 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 KCNE5Q9UJ90 142 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 IGLON5A6NGN9 336 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 MANSC4A6NHS7 340 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 MCIDASD6RGH6 385 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 F5H0A9 414 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 BLOC1S5-TXNDC5H3BN57 136 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 CLEC3AO75596 197 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 GABRA3P34903 492 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 CENPAP49450 140 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 LTBQ06643 244 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF658BQ4V348 819 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 SULF2Q8IWU5 870 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 OR4E2Q8NGC2 313 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 DNTTIP1Q9H147 329 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ESRP2Q9H6T0 727 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC22A11Q9NSA0 550 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TMEM74BQ9NUR3 256 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 KANTRA0A1W2PQU2 76 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 GXYLT2A0PJZ3 443 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 DUXAA6NLW8 204 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TO15178 435 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 SIGLEC6O43699 453 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TBX19O60806 448 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 WDPCPO95876 746 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 PAK4O96013 591 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF806P0C7X5 589 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 PPP2CBP62714 309 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 PPP2CAP67775 309 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ACTC1P68032 377 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ACTA1P68133 377 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 RBMS2Q15434 407 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 MANEAQ5SRI9 462 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TMEM64Q6YI46 380 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF627Q7L945 461 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 OVCH1Q7RTY7 1134 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 RD3Q7Z3Z2 195 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 PUSL1Q8N0Z8 303 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 OR51A4Q8NGJ6 313 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 OR1S2Q8NGQ3 325 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 CXorf40AQ8TE69 158 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 PAQR8Q8TEZ7 354 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 CASTOR1Q8WTX7 329 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 UQCC2Q9BRT2 126 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 SLITRK2Q9H156 845 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 POFUT1Q9H488 388 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF223Q9UK11 482 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 NOP16Q9Y3C1 178 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3EA0A087X179 549 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF705EA8MWA4 302 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 PRR32B1ATL7 298 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 F8W036 122 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 SOX1O00570 391 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 FADS1O60427 444 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 NGFRP08138 427 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF888P0CJ79 500 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 CPMP14384 443 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 CPN1P15169 458 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ADRA2CP18825 462 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 HOXD10P28358 340 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 BLOC1S1P78537 153 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 FGL1Q08830 312 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 SRSF5Q13243 272 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 SQSTM1Q13501 440 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 UBXN2BQ14CS0 331 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 MLC1Q15049 377 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ALG10BQ5I7T1 473 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 RPL22L1Q6P5R6 122 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 BAIAP2L2Q6UXY1 529 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 STAC2Q6ZMT1 411 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 LRRTM1Q86UE6 522 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 C12orf40Q86WS4 652 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF676Q8N7Q3 588 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2L5Q8NG80 312 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 NANPQ8TBE9 248 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 FBXO17Q96EF6 278 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 GIMAP5Q96F15 307 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF514Q96K75 400 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 TREM1Q9NP99 234 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 INPP5EQ9NRR6 644 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 MYO15AQ9UKN7 3530 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 TRAV8-7A0A075B6U6 113 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ARPC4-TTLL3A0A0A6YYG9 625 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ITGA10O75578 1167 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC25A12O75746 678 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms