RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HOXA1P49639 335 aaPredicted RBP13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 RAB5BP61020 215 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 C17orf67Q0P5P2 114 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 TBC1D28Q2M2D7 210 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 GLB1L2Q8IW92 636 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 OR5AS1Q8N127 324 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 GNG12Q9UBI6 72 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 FBXO4Q9UKT5 387 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 TMED7Q9Y3B3 224 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 IGHV1OR15-9A0A0B4J2B8 117 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 NXPH3O95157 252 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 NFYBP25208 207 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 IMPA1P29218 277 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 TNK1Q13470 666 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 EDDM3AQ14507 147 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 DHRS13Q6UX07 377 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF813Q6ZN06 617 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 OR2T11Q8NH01 316 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 MIB2Q96AX9 1013 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF225Q9UK10 706 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 NUBP2Q9Y5Y2 271 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF814B7Z6K7 855 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 ALDOCP09972 364 aaKnown RBP13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 GCAP28676 217 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 RFC3P40938 356 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 TGM4P49221 684 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 SRSF5Q13243 272 aaKnown RBP13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 IL10RAQ13651 578 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 BATF2Q8N1L9 274 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 LILRA3Q8N6C8 439 aaPredicted RBP13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 FOXRED1Q96CU9 486 aaPredicted RBP13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 GIMAP5Q96F15 307 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 BOD1Q96IK1 185 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 OR14A2Q96R54 314 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 ATPIF1Q9UII2 106 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 LHX6Q9UPM6 363 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 MMACHCQ9Y4U1 282 aa13.15□□□□□ -0.31
PCDHA11-201ENST00000398640 METTL15A6NJ78 407 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 A8MXE2 369 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 M0R1B8 84 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 CDK1P06493 297 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 RPL34P49207 117 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 PPIAP62937 165 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 OR2G6Q5TZ20 316 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 METRNLQ641Q3 311 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 DCLRE1CQ96SD1 692 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 ATOH8Q96SQ7 321 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 PRAMEF25A6NGN4 478 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 LRRC30A6NM36 301 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 ZIC2O95409 532 aaPredicted RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 GASTP01350 101 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 NPSR1Q6W5P4 371 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 HAVCR2Q8TDQ0 301 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 ZBTB8AQ96BR9 441 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 TNFRSF13CQ96RJ3 184 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 PRRT1Q99946 306 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 SERINC4A6NH21 518 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 OR7A17O14581 309 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 SURF4O15260 269 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC22A25Q6T423 547 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 HYLS1Q96M11 299 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 IGLV3-25P01717 112 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 GSTP1P09211 210 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 GM2AP17900 193 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 CLDN12P56749 244 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 CMPK2Q5EBM0 449 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 CBLL1Q75N03 491 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 ADGRG5Q8IZF4 528 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 BRIX1Q8TDN6 353 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 TIMD4Q96H15 378 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 C1orf198Q9H425 327 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 RPS10P5Q9NQ39 176 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 PRELID1Q9Y255 219 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 TMEM72A0PK05 275 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 CTSLP07711 333 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 GIFP27352 417 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 GPR3P46089 330 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 EMP3P54852 163 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 EIF3IQ13347 325 aaKnown RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 FAM83HQ6ZRV2 1179 aaPredicted RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 OLIG3Q7RTU3 272 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 DNAJC22Q8N4W6 341 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 BEST4Q8NFU0 473 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 ABHD11Q8NFV4 315 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 COQ10AQ96MF6 247 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 MED18Q9BUE0 208 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 ANKRD60Q9BZ19 345 aa13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 SAV1Q9H4B6 383 aaPredicted RBP13.14□□□□□ -0.31
PCDHA11-201ENST00000398640 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 NXPH2O95156 264 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 FCRLAQ7L513 359 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 PAQR8Q8TEZ7 354 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms