RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 BCL2L10Q9HD36 194 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 SIRT3Q9NTG7 399 aaPredicted RBP13.78□□□□□ -0.2
CYLD-202ENST00000398568 PCDHGA1Q9Y5H4 931 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 C9orf170A2RU37 121 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
CYLD-202ENST00000398568 OR2AG2A6NM03 316 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 CCSO14618 274 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 TCAPO15273 167 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 MAGEB4O15481 346 aaPredicted RBP13.78□□□□□ -0.2
CYLD-202ENST00000398568 ADH1AP07327 375 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 ATP1B3P54709 279 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 OR4E2Q8NGC2 313 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 NUBPLQ8TB37 319 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 UBE2E3Q969T4 207 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 GNG8Q9UK08 70 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 MEIS3P1A6NDR6 274 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 BTBD17A6NE02 478 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 AQP2P41181 271 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 EPHB3P54753 998 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 CLINT1Q14677 625 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 USF2Q15853 346 aaPredicted RBP13.78□□□□□ -0.2
CYLD-202ENST00000398568 CDKN3Q16667 212 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 RPL22L1Q6P5R6 122 aaKnown RBP13.78□□□□□ -0.2
CYLD-202ENST00000398568 ETV3LQ6ZN32 361 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 ARL6IP6Q8N6S5 226 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 TMEM255BQ8WV15 326 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 KISS1RQ969F8 398 aaPredicted RBP13.78□□□□□ -0.2
CYLD-202ENST00000398568 SLC41A3Q96GZ6 507 aa13.78□□□□□ -0.2
CYLD-202ENST00000398568 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
CYLD-202ENST00000398568 SYNDIG1LA6NDD5 238 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 M0R036 132 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 CASP6P55212 293 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 RFLNAQ6ZTI6 216 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 DPPA2Q7Z7J5 298 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 OTUB2Q96DC9 234 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 PIK3IP1Q96FE7 263 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 CASD1Q96PB1 797 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 CHRDQ9H2X0 955 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 ADGRL4Q9HBW9 690 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 ACKR4Q9NPB9 350 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 CBY1Q9Y3M2 126 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 ETV7Q9Y603 341 aa13.77□□□□□ -0.2
CYLD-202ENST00000398568 PRRC2BQ5JSZ5 2229 aaKnown RBP13.77□□□□□ -0.2
CYLD-202ENST00000398568 hCG_1809904A0A1W2PP81 198 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 A0A1W2PR64 198 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 A0A1W2PRV1 198 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 TSTD3H0UI37 97 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 EMC8O43402 210 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 CTNSO60931 367 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 TMEM127O75204 238 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 IRF1P10914 325 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 CAV2P51636 162 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 TBPL1P62380 186 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 ACTA2P62736 377 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 RPS15P62841 145 aaKnown RBP13.77□□□□□ -0.21
CYLD-202ENST00000398568 ACTG2P63267 376 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 PYY3Q5JQD4 70 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 TPRG1Q6ZUI0 275 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 POTEKPQ9BYX7 375 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 DPH1Q9BZG8 443 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 TMEM100Q9NV29 134 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 A0A1W2PPH5 198 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 STMND1H3BQB6 276 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 RTCAO00442 366 aaKnown RBP13.77□□□□□ -0.21
CYLD-202ENST00000398568 ZNF208O43345 1280 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 PAPLNO95428 1278 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 HPGDP15428 266 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 CORO1AP31146 461 aaKnown RBP13.77□□□□□ -0.21
CYLD-202ENST00000398568 IRF4Q15306 451 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 STEAP1BQ6NZ63 245 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 LCTLQ6UWM7 567 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 DVL3Q92997 716 aaPredicted RBP13.77□□□□□ -0.21
CYLD-202ENST00000398568 ISOC2Q96AB3 205 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 NKX2-4Q9H2Z4 354 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 SFXN1Q9H9B4 322 aa13.77□□□□□ -0.21
CYLD-202ENST00000398568 GAR1Q9NY12 217 aaKnown RBP13.77□□□□□ -0.21
CYLD-202ENST00000398568 YBX2Q9Y2T7 364 aaKnown RBP13.77□□□□□ -0.21
CYLD-202ENST00000398568 IGLV3-16A0A075B6K0 115 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 A0A0B4J2A0 478 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CDC42EP2O14613 210 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 BNIP3LO60238 219 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 TEAD1P28347 426 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 SERPINA4P29622 427 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 TRHRP34981 398 aaPredicted RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 LASP1Q14847 261 aaKnown RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 VRK2Q86Y07 508 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 TDHQ8IZJ6 230 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CYB561A3Q8NBI2 242 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 OR4C6Q8NH72 309 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 ZBTB8AQ96BR9 441 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 PELI1Q96FA3 418 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 HS6ST2Q96MM7 605 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 SHPKQ9UHJ6 478 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 NTNG1Q9Y2I2 539 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 KPTNQ9Y664 436 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 PPIHO43447 177 aaKnown RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 PRICKLE3O43900 615 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms