RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 BCORP1Q8N888 145 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 RCBTB1Q8NDN9 531 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 SP7Q8TDD2 431 aaPredicted RBP4.53□□□□□ -1.69
SMAD4-202ENST00000398417 ADAMTS14Q8WXS8 1223 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 DVL3Q92997 716 aaPredicted RBP4.53□□□□□ -1.69
SMAD4-202ENST00000398417 MAP3K3Q99759 626 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 DTX4Q9Y2E6 619 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 C2orf72A6NCS6 295 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF879B4DU55 563 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 J3QR89 54 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GOSR2O14653 212 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SCO1O75880 301 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 C1QBP02746 253 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 APEHP13798 732 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF823P16415 610 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SPI1P17947 270 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TACR3P29371 465 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZP2Q05996 745 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SCGB2B2Q4G0G5 96 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 NKAIN2Q5VXU1 208 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF321PQ8N8H1 164 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OR4D10Q8NGI6 311 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 BAHD1Q8TBE0 780 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GON7Q9BXV9 100 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SEMA4CQ9C0C4 833 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TSPAN10Q9H1Z9 355 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 EVA1BQ9NVM1 165 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 DHCR7Q9UBM7 475 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ING1Q9UK53 422 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 V9GY05 133 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ASCC3Q8N3C0 2202 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 IGHV3-20A0A0C4DH32 117 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM72A0PK05 275 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TRABD2BA6NFA1 517 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 HCRTR2O43614 444 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZIC2O95409 532 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 CBX7O95931 251 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 PROS1P07225 676 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TACSTD2P09758 323 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GP1BBP13224 206 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 HOXD11P31277 338 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ART1P52961 327 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ATXN7L3Q14CW9 347 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TRAM1Q15629 374 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 RNF151Q2KHN1 245 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 PRAMEF17Q5VTA0 474 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 KIAA0895LQ68EN5 471 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 RPL13AP3Q6NVV1 102 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 C19orf48Q6RUI8 117 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 METAP1DQ6UB28 335 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM92Q6UXU6 159 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TPRA1Q86W33 373 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 FAM109AQ8N4B1 249 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OR52I2Q8NH67 350 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 NRIP3Q9NQ35 241 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 KLHL9Q9P2J3 617 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF223Q9UK11 482 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 PRSS44E7EML9 344 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 HRKO00198 91 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SOX1O00570 391 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 FBXO24O75426 580 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GTF2F2P13984 249 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 NPR2P20594 1047 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 S100GP29377 79 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM69Q5SWH9 247 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SHISA6Q6ZSJ9 500 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 CASTOR1Q8WTX7 329 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ANKRD9Q96BM1 317 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 G6PC3Q9BUM1 346 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OR10A5Q9H207 317 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 NIPAL2Q9H841 368 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 AKIRIN1Q9H9L7 192 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 LIN7CQ9NUP9 197 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TAS2R10Q9NYW0 307 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OR5K3A6NET4 321 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 PRICKLE3O43900 615 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 RBBP9O75884 186 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GPANK1O95872 356 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 LCN1P31025 176 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OC90Q02509 493 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 RPL6Q02878 288 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF613Q6PF04 617 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OR2T35Q8NGX2 323 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNRF4Q8WWF5 429 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 RRNAD1Q96FB5 475 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 POM121Q96HA1 1249 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TRIB1Q96RU8 372 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 MICU1Q9BPX6 476 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 METTL17Q9H7H0 456 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 IL20Q9NYY1 176 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GDE1Q9NZC3 331 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 LAMP5Q9UJQ1 280 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 MRTO4Q9UKD2 239 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SLC22A13Q9Y226 551 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 TNCP24821 2201 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SPTBN2O15020 2390 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZSCAN5BA6NJL1 495 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GJE1A6NN92 205 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms