RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CRYABP02511 175 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 F13BP05160 661 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 ZNF708P17019 499 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 ZNF43P17038 809 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 CRABP1P29762 137 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 P2RY4P51582 365 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 ST3GAL4Q11206 333 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 CRMP1Q14194 572 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 PON3Q15166 354 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 SMN1Q16637 294 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 PLBD1Q6P4A8 553 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 AHSA2Q719I0 299 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 POMGNT2Q8NAT1 580 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 OR4K13Q8NH42 304 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 ZNF519Q8TB69 540 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 CRELD1Q96HD1 420 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 TMEM80Q96HE8 168 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 DDOQ99489 341 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 ALG12Q9BV10 488 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 NMNAT2Q9BZQ4 307 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 FGF20Q9NP95 211 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 CHCHD3Q9NX63 227 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 VSX1Q9NZR4 365 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 ZNF346Q9UL40 294 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 B3GNT3Q9Y2A9 372 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 GPR52Q9Y2T5 361 aa17.05■□□□□ 0.32
TSPAN4-204ENST00000397404 TRGV5A0A0B4J1U4 118 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 A0A0J9YW62 118 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 A0A1W2PNR3 127 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 FAM166BA8MTA8 275 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 C11orf98E9PRG8 122 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 EIF1AYO14602 144 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 CPN1P15169 458 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 JUNBP17275 347 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 LHX2P50458 406 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 FOXK1P85037 733 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 GGTLC2Q14390 218 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 TBCEQ15813 527 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 TBR1Q16650 682 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 VASNQ6EMK4 673 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 SLC35D2Q76EJ3 337 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 IGFN1Q86VF2 1251 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 SPARTQ8N0X7 666 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 PTP4A1Q93096 173 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 Q96M85 177 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 LDAHQ9H6V9 325 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 DIMT1Q9UNQ2 313 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 EXOGQ9Y2C4 368 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 EXOSC1Q9Y3B2 195 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 FKBP7Q9Y680 259 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 ZFHX4Q86UP3 3567 aa17.04■□□□□ 0.32
TSPAN4-204ENST00000397404 A0A1B0GVC2 190 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 PRSS37A4D1T9 235 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 M0R129 80 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 TNFSF11O14788 317 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 RAB36O95755 333 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 ATP6V1B1P15313 513 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 TCEA1P23193 301 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 ACVR1BP36896 505 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 ACTC1P68032 377 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 ACTA1P68133 377 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 POU3F1Q03052 451 aaPredicted RBP17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 C1DQ13901 141 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 SF3B4Q15427 424 aaKnown RBP eCLIP17.03■□□□□ 0.322e-7■■■■■ 32.9
TSPAN4-204ENST00000397404 LEG1Q6P5S2 330 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 PM20D2Q8IYS1 436 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 TMEM99Q8N816 258 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 OR6X1Q8NH79 312 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 ASB10Q8WXI3 467 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 SMPDL3BQ92485 455 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 MRPL48Q96GC5 212 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 MNTQ99583 582 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 TEAD3Q99594 435 aa17.03■□□□□ 0.32
TSPAN4-204ENST00000397404 SLC2A10O95528 541 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 MYL12AP19105 171 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 SLC2A5P22732 501 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 SHC1P29353 583 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 NUDT6P53370 316 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 CLDN18P56856 261 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 GXYLT1Q4G148 440 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 GTF2IRD2BQ6EKJ0 949 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 UNQ6494/PRO21346Q6UXR6 183 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 GTF2IRD2Q86UP8 949 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 SDR9C7Q8NEX9 313 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 OR10D3Q8NH80 312 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 PNPLA2Q96AD5 504 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 INTS12Q96CB8 462 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 RNFT2Q96EX2 444 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 NMNAT3Q96T66 252 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 CCDC90BQ9GZT6 254 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 GP6Q9HCN6 339 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 B3GAT1Q9P2W7 334 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 MCTS1Q9ULC4 181 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 ERGIC3Q9Y282 383 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 RAXQ9Y2V3 346 aa17.02■□□□□ 0.32
TSPAN4-204ENST00000397404 SMIM31A0A1B0GVY4 71 aa17.01■□□□□ 0.31
TSPAN4-204ENST00000397404 NPIPA2E9PIF3 369 aa17.01■□□□□ 0.31
TSPAN4-204ENST00000397404 NPIPA3F8WFD2 350 aa17.01■□□□□ 0.31
TSPAN4-204ENST00000397404 AQP7O14520 342 aa17.01■□□□□ 0.31
TSPAN4-204ENST00000397404 GPR171O14626 319 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms