RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NR2F1P10589 423 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 RPS5P46782 204 aaKnown RBP12.77□□□□□ -0.37
SEC13-206ENST00000397102 PTDSS1P48651 473 aaKnown RBP12.77□□□□□ -0.37
SEC13-206ENST00000397102 IL13RA1P78552 427 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 TEKQ02763 1124 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 PIGFQ07326 219 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 C1DQ13901 141 aaKnown RBP12.77□□□□□ -0.37
SEC13-206ENST00000397102 OCLNQ16625 522 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 NKPD1Q17RQ9 610 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 DPY19L1Q2PZI1 675 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 LIN52Q52LA3 116 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 PHYHD1Q5SRE7 291 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 DOK3Q7L591 496 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 ZNF627Q7L945 461 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 VRK2Q86Y07 508 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 SIGLECL1Q8N7X8 197 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 LRRC58Q96CX6 371 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 ZIM3Q96PE6 472 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 PPCSQ9HAB8 311 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 GPR160Q9UJ42 338 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 DNAJC9-AS1A6NH13 148 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 SMIM23A6NLE4 172 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 C17orf100A8MU93 164 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 AIM2O14862 343 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 RAB36O95755 333 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
SEC13-206ENST00000397102 LSP1P33241 339 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 CRYBB2P43320 205 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 CCL8P80075 99 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 EGR4Q05215 589 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 CHI3L2Q15782 390 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 PCGF3Q3KNV8 242 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 ALKBH6Q3KRA9 238 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 SPANXN4Q5MJ08 99 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 RNF220Q5VTB9 566 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 ATG16L1Q676U5 607 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 ZNF813Q6ZN06 617 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 IFT20Q8IY31 132 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 TRIML2Q8N7C3 387 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 OR52P1PQ8NH57 321 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 APOPT1Q96IL0 206 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 CCDC115Q96NT0 180 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 SLITRK2Q9H156 845 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 HINT3Q9NQE9 182 aaKnown RBP12.76□□□□□ -0.37
SEC13-206ENST00000397102 MED29Q9NX70 200 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 NKIRAS2Q9NYR9 191 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 ZNF224Q9NZL3 707 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 BTNL2Q9UIR0 455 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 FBXL3Q9UKT7 428 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 WIPI2Q9Y4P8 454 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 PRKDCP78527 4128 aaKnown RBP12.76□□□□□ -0.37
SEC13-206ENST00000397102 ARHGAP32A7KAX9 2087 aa12.76□□□□□ -0.37
SEC13-206ENST00000397102 IGHV1-69-2A0A0G2JMI3 117 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 LOC102725191A0A1B0GVB3 256 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 CLDN25C9JDP6 229 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 TRAF3IP2O43734 574 aaPredicted RBP12.75□□□□□ -0.37
SEC13-206ENST00000397102 PRG2P13727 222 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 ZFP36P26651 326 aaKnown RBP12.75□□□□□ -0.37
SEC13-206ENST00000397102 RAD52P43351 418 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 GIPRP48546 466 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 RAB1AP62820 205 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 RGS7BPQ6MZT1 257 aaPredicted RBP12.75□□□□□ -0.37
SEC13-206ENST00000397102 TMEM154Q6P9G4 183 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 RETREG3Q86VR2 466 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 TREML1Q86YW5 311 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 C20orf196Q8IYI0 205 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 SNX33Q8WV41 574 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 KTI12Q96EK9 354 aaPredicted RBP12.75□□□□□ -0.37
SEC13-206ENST00000397102 LRR1Q96L50 414 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 GPA33Q99795 319 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 C1QTNF5Q9BXJ0 243 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 B3GAT2Q9NPZ5 323 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 TAAR3PQ9P1P4 343 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 POFUT2Q9Y2G5 429 aa12.75□□□□□ -0.37
SEC13-206ENST00000397102 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 SLC22A23A1A5C7 686 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 CCDC154A6NI56 674 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 M0R082 166 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 OR2T1O43869 369 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 UBL3O95164 117 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 NUDT17P0C025 328 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 B4GALT1P15291 398 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 CLNS1AP54105 237 aaKnown RBP12.74□□□□□ -0.37
SEC13-206ENST00000397102 SELENOVP59797 346 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 RAB39AQ14964 217 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 MFSD13AQ14CX5 517 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 MAPK11Q15759 364 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 COX20Q5RI15 118 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 FAM69AQ5T7M9 428 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 CARD17Q5XLA6 110 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 SNX32Q86XE0 403 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 LRRC34Q8IZ02 419 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 CLIP4Q8N3C7 705 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 ZNF417Q8TAU3 575 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 EPS8L3Q8TE67 593 aaKnown RBP12.74□□□□□ -0.37
SEC13-206ENST00000397102 RAB1CQ92928 201 aa12.74□□□□□ -0.37
SEC13-206ENST00000397102 POP5Q969H6 163 aaKnown RBP12.74□□□□□ -0.37
SEC13-206ENST00000397102 TIMD4Q96H15 378 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms