RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TAS2R41P59536 307 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 POU3F1Q03052 451 aaPredicted RBP12.2□□□□□ -0.46
SEC13-204ENST00000397099 ZNF74Q16587 644 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 PGGHGQ32M88 737 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 TBRG1Q3YBR2 411 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 CARM1Q86X55 608 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 MICU2Q8IYU8 434 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 BCL2L2Q92843 193 aaPredicted RBP12.2□□□□□ -0.46
SEC13-204ENST00000397099 RCN3Q96D15 328 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 OR2M2Q96R28 347 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 WFDC6Q9BQY6 131 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 KATNB1Q9BVA0 655 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 DENND2DQ9H6A0 471 aaPredicted RBP12.2□□□□□ -0.46
SEC13-204ENST00000397099 STX18Q9P2W9 335 aaKnown RBP12.2□□□□□ -0.46
SEC13-204ENST00000397099 USF3Q68DE3 2245 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 VSTM5A8MXK1 200 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 ZNF99A8MXY4 864 aaPredicted RBP12.19□□□□□ -0.46
SEC13-204ENST00000397099 UPK3AO75631 287 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 CRYAAP02489 173 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 MT-ND1P03886 318 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 SOD3P08294 240 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 ADORA3P0DMS8 318 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 AHCYP23526 432 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 PRDX6P30041 224 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 TTKP33981 857 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 CRYBA2P53672 197 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 SELENOWP63302 87 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 CHRNB3Q05901 458 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 HIKESHIQ53FT3 197 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 CYBRD1Q53TN4 286 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 ZNF627Q7L945 461 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 C20orf196Q8IYI0 205 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 TMEM123Q8N131 208 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
SEC13-204ENST00000397099 MOGAT1Q96PD6 335 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 SLC38A2Q96QD8 506 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 TRAF4Q9BUZ4 470 aaPredicted RBP12.19□□□□□ -0.46
SEC13-204ENST00000397099 CRLF2Q9HC73 371 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 CBLN4Q9NTU7 201 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 ARMCX1Q9P291 453 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 CRNNQ9UBG3 495 aaPredicted RBP12.19□□□□□ -0.46
SEC13-204ENST00000397099 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
SEC13-204ENST00000397099 SLC35F4A4IF30 521 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 TRIM64A6NGJ6 449 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 TRIM64BA6NI03 449 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 CENPBD1B2RD01 187 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 MGRN1O60291 552 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
SEC13-204ENST00000397099 ARR3P36575 388 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 FABP6P51161 128 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 ST3GAL3Q11203 375 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 SF3A3Q12874 501 aaKnown RBP eCLIP12.18□□□□□ -0.46
SEC13-204ENST00000397099 CEACAM16Q2WEN9 425 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
SEC13-204ENST00000397099 CPLX4Q7Z7G2 160 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 RBM45Q8IUH3 476 aaKnown RBP12.18□□□□□ -0.46
SEC13-204ENST00000397099 MUC15Q8N387 334 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 OR4F15Q8NGB8 312 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 OR4D11Q8NGI4 311 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 OR6X1Q8NH79 312 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 NANOS1Q8WY41 292 aaKnown RBP12.18□□□□□ -0.46
SEC13-204ENST00000397099 COX4I2Q96KJ9 171 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 RIMS3Q9UJD0 308 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 FBXL3Q9UKT7 428 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 USP22Q9UPT9 525 aa12.18□□□□□ -0.46
SEC13-204ENST00000397099 A0A1W2PR80 420 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 GMNCA6NCL1 334 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 E7EQL1 145 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 GSTA4O15217 222 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 RNF13O43567 381 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 PDE5AO76074 875 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 LYPD3O95274 346 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 LY6G6DO95868 133 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 CH25HO95992 272 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 IGKV3-15P01624 115 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 IGLV1-44P01699 117 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 HEXAP06865 529 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 ASAH2BP0C7U1 165 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 UMPSP11172 480 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 NR2C1P13056 603 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 CBLP22681 906 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 DSCR9P59020 149 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 ARF1P84077 181 aaKnown RBP12.17□□□□□ -0.46
SEC13-204ENST00000397099 NHLRC1Q6VVB1 395 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 DEF8Q6ZN54 512 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 NANOGNBQ7Z5D8 188 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 SLC15A3Q8IY34 581 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 POU5F2Q8N7G0 328 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 OR6N1Q8NGY5 312 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 TMEM239Q8WW34 195 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 GEMIN6Q8WXD5 167 aaKnown RBP12.17□□□□□ -0.46
SEC13-204ENST00000397099 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 SLC25A44Q96H78 314 aaPredicted RBP12.17□□□□□ -0.46
SEC13-204ENST00000397099 ELAC2Q9BQ52 826 aaKnown RBP12.17□□□□□ -0.46
SEC13-204ENST00000397099 PRSS27Q9BQR3 290 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 ULBP2Q9BZM5 246 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 POFUT2Q9Y2G5 429 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 MED31Q9Y3C7 131 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms