RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TUSC2O75896 110 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PTPN6P29350 595 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CYB561P49447 251 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF266Q14584 549 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MLF2Q15773 248 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 LPAL2Q16609 132 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF674Q2M3X9 581 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM71Q6P5X7 295 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM185AQ8NFB2 350 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 INTS12Q96CB8 462 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ABHD6Q9BV23 337 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CD300AQ9UGN4 299 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MRPS2Q9Y399 296 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PLXNB2O15031 1838 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM72A0PK05 275 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 BOLA2-SMG1P6H3BVE0 249 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PIP5K1CO60331 668 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF254O75437 659 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CHRNB1P11230 501 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MTHFD2P13995 350 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PPP3CBP16298 524 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RAB6AP20340 208 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 LYPD4Q6UWN0 246 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 IDO2Q6ZQW0 420 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 Q6ZTK2 550 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 OR13C2Q8NGS9 318 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SDSLQ96GA7 329 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TM7SF3Q9NS93 570 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SLAMF8Q9P0V8 285 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CEPT1Q9Y6K0 416 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 A6NHS1 94 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PPP6CO00743 305 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 HOXC11O43248 304 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 HCRTR1O43613 425 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SULT1B1O43704 296 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MT-ND4P03905 459 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 BCKDHBP21953 392 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 DAPP51397 102 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MFAP5Q13361 173 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 P2RY14Q15391 338 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 KCNJ8Q15842 424 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 OR6V1Q8N148 313 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SLC25A43Q8WUT9 341 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 DUSP22Q9NRW4 184 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 FGF21Q9NSA1 209 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 F6UZH7 168 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ABHD16AO95870 558 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ELAVL4P26378 380 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 IL3RAP26951 378 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 APOBEC1P41238 236 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RAB5CP51148 216 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 GABREP78334 506 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ELAVL1Q15717 326 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 LEXMQ3ZCV2 418 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 LINC00299Q6ZSB3 139 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 AAED1Q7RTV5 226 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 OR51A2Q8NGJ7 313 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TM4SF18Q96CE8 201 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 E9PI62 339 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 BET1O15155 118 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 NPPBP16860 134 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TCN2P20062 427 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SNCAP37840 140 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RGRP47804 291 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 P2RX1P51575 399 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 DPTQ07507 201 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 GRINAQ7Z429 371 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 OR5T1Q8NG75 326 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 OR52I1Q8NGK6 324 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RLN3Q8WXF3 142 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 LRFN5Q96NI6 719 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF576Q9H609 170 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 H0YIG0 161 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RFXAPO00287 272 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SLC16A6O15403 523 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RAF1P04049 648 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 EIF4EP06730 217 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 NUDT7P0C024 238 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 DPP4P27487 766 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM52BQ4KMG9 183 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMEFF1Q8IYR6 380 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CHTF18Q8WVB6 975 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 GHSRQ92847 366 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SLAMF9Q96A28 289 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMIGD2Q96BF3 282 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF582Q96NG8 517 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 QRSL1Q9H0R6 528 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RBFOX1Q9NWB1 397 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SPAG17Q6Q759 2223 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 A0A0U1RQS6 177 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ADAM12O43184 909 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HOXB5P09067 269 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 FPR3P25089 353 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SFXN4Q6P4A7 337 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 OR14J1Q9UGF5 321 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 RAB22AQ9UL26 194 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HEMK1Q9Y5R4 338 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ARFGEF1Q9Y6D6 1849 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM200CA6NKL6 621 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms