RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 EFCAB10A6NFE3 127 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF814B7Z6K7 855 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 NPIPA5E9PKD4 350 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 XKRYO14609 159 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 RGS10O43665 173 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 CDKN2AP42771 156 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 EIF1AXP47813 144 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 LHX2P50458 406 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 H3F3AP84243 136 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 HSF1Q00613 529 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 KLHL12Q53G59 568 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 NIPAL3Q6P499 406 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 UEVLDQ8IX04 471 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 STX19Q8N4C7 294 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 ARIH2OSQ8N7S6 290 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 RBMXL3Q8N7X1 1067 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 OR10D3Q8NH80 312 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 NEIL3Q8TAT5 605 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 SNRNP27Q8WVK2 155 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 ZCCHC14Q8WYQ9 949 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 OXGR1Q96P68 337 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 SRXN1Q9BYN0 137 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 OR51V1Q9H2C8 321 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 B3GAT1Q9P2W7 334 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 NPIPA1Q9UND3 350 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 NOX1Q9Y5S8 564 aa18.27■□□□□ 0.52
VCPKMT-202ENST00000395860 ARHGEF9O43307 516 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 BCL10O95999 233 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 ACTL6AO96019 429 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 HTR1AP08908 422 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 IFNGR1P15260 489 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 ZNF708P17019 499 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 KLK2P20151 261 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 SLC15A1P46059 708 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 DAP3P51398 398 aaKnown RBP18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 MELKQ14680 651 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 SLC35D2Q76EJ3 337 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 OR9Q1Q8NGQ5 310 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 TIGARQ9NQ88 270 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 RASD1Q9Y272 281 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 TP53TG5Q9Y2B4 290 aa18.27■□□□□ 0.51
VCPKMT-202ENST00000395860 IGHV3-15A0A0B4J1V0 119 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 MED19A0JLT2 244 aaPredicted RBP18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 OR6C68A6NDL8 312 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 CXCL13O43927 109 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 RENP00797 406 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 PIPP12273 146 aaPredicted RBP18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 HTR1FP30939 366 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 MTNR1AP48039 350 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 AGFG1P52594 562 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 SLC16A1P53985 500 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 CLDN15P56746 228 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 CLDN18P56856 261 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 RPS7P62081 194 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 SRYQ05066 204 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 ST3GAL4Q11206 333 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 MEPCEQ7L2J0 689 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 MEIOBQ8N635 442 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 ZNF519Q8TB69 540 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 ZPLD1Q8TCW7 415 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 RNFT2Q96EX2 444 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 DDOQ99489 341 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 B3GNT3Q9Y2A9 372 aa18.26■□□□□ 0.51
VCPKMT-202ENST00000395860 NPIPB13A6NJU9 1138 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 TRIM64CA6NLI5 447 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 NPIPB4C9JG80 1138 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 MRPS14O60783 128 aaKnown RBP18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 RAMP1O60894 148 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 GYPBP06028 91 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 CDK1P06493 297 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 STSP08842 583 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 CLUP10909 449 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 ZNF43P17038 809 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 ENPP1P22413 925 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 C1DQ13901 141 aaKnown RBP18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 ASB18Q6ZVZ8 466 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 PRSS48Q7RTY5 328 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 ADCK1Q86TW2 530 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 SPARTQ8N0X7 666 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 ASB10Q8WXI3 467 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 UCN2Q96RP3 112 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 TSPAN10Q9H1Z9 355 aaPredicted RBP18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 RPRD1BQ9NQG5 326 aaKnown RBP18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 MED29Q9NX70 200 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 SLC22A31A6NKX4 558 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 H7C1C5 153 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 VAMP5O95183 116 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 MT-ND2P03891 347 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 SLC2A5P22732 501 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 LCN6P62502 163 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 DBPQ10586 325 aaPredicted RBP18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 BCL2A1Q16548 175 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 KLHL22Q53GT1 634 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 ARMC4Q5T2S8 1044 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 VASNQ6EMK4 673 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 CPNE4Q96A23 557 aaPredicted RBP18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 KLHL13Q9P2N7 655 aa18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 WARS2Q9UGM6 360 aaKnown RBP18.25■□□□□ 0.51
VCPKMT-202ENST00000395860 ZNF407Q9C0G0 2248 aa18.24■□□□□ 0.51
VCPKMT-202ENST00000395860 LOC102725191A0A1B0GVB3 256 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms