RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 EXOSC3Q9NQT5 275 aaKnown RBP11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF224Q9NZL3 707 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 A8MXK9 166 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 CLPTM1O96005 669 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 SDC1P18827 310 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 CCNA2P20248 432 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 HTR3AP46098 478 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 MAP2K6P52564 334 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 RPS23P62266 143 aaKnown RBP11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 TEKQ02763 1124 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 CEACAM7Q14002 265 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 GPR68Q15743 365 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 C2orf68Q2NKX9 166 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 ALKBH6Q3KRA9 238 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 GLIPR1L2Q4G1C9 344 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 FAM205BPQ63HN1 556 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 NIPAL3Q6P499 406 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 USP51Q70EK9 711 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 CMIPQ8IY22 773 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 PARP8Q8N3A8 854 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 OR5D16Q8NGK9 328 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF563Q8TA94 476 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 RAB1CQ92928 201 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 CCDC126Q96EE4 140 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 TSPAN32Q96QS1 320 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 CCT7Q99832 543 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 GAL3ST1Q99999 423 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 CHIAQ9BZP6 476 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 FAM107BQ9H098 131 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 GPR35Q9HC97 309 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 TMEM216Q9P0N5 145 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 SH3BP4Q9P0V3 963 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 ASH2LQ9UBL3 628 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 SEC14L4Q9UDX3 406 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 SLC35A3Q9Y2D2 325 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 TANC2Q9HCD6 1990 aa11.54□□□□□ -0.56
VCPKMT-201ENST00000395859 EBAG9O00559 213 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 AKAP10O43572 662 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 VAMP5O95183 116 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 TGDSO95455 350 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 OPN1MWP04001 364 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 GPIP06744 558 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 GUSBP08236 651 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 KRT16P08779 473 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 OPN1MW2P0DN77 364 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 OPN1MW3P0DN78 364 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF250P15622 560 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 ALDH3A1P30838 453 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 CD80P33681 288 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 RYKP34925 604 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 CCT3P49368 545 aaKnown RBP11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 WDR4P57081 412 aaKnown RBP11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 RPL15P61313 204 aaKnown RBP11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 PAX2Q02962 417 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 MPP2Q14168 576 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 PDCD1Q15116 288 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF627Q7L945 461 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 GPAT4Q86UL3 456 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 TMEM86BQ8N661 226 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 OR56A1Q8NGH5 318 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 DACT3Q96B18 629 aaPredicted RBP11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 UPRTQ96BW1 309 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 TIMD4Q96H15 378 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 TCF7L1Q9HCS4 588 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 SLC6A13Q9NSD5 602 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 TAAR3PQ9P1P4 343 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 MKLN1Q9UL63 735 aa11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 FAF1Q9UNN5 650 aaPredicted RBP11.53□□□□□ -0.56
VCPKMT-201ENST00000395859 DOCK11Q5JSL3 2073 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 A0A1W2PPW3 197 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 AP3D1O14617 1153 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 STX11O75558 287 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 UBOX5O94941 541 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 HLA-HP01893 362 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 SERPINB5P36952 375 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 IDH2P48735 452 aaKnown RBP11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 POLR2HP52434 150 aaKnown RBP11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 TP53BP2Q13625 1128 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 OR7A5Q15622 319 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 NKPD1Q17RQ9 610 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 CEACAM16Q2WEN9 425 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 DEFB112Q30KQ8 113 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 ARHGAP11BQ3KRB8 267 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 PRAMEF8Q5VWM4 474 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 PRAMEF7Q5VXH5 474 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 PIGWQ7Z7B1 504 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 ZNF584Q8IVC4 421 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 OR52E2Q8NGJ4 325 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 SFXN5Q8TD22 340 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 ZG16BQ96DA0 208 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 MTERF3Q96E29 417 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 L3HYPDHQ96EM0 354 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 GSTO2Q9H4Y5 243 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 TNFRSF12AQ9NP84 129 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 RCE1Q9Y256 329 aa11.52□□□□□ -0.57
VCPKMT-201ENST00000395859 IGHV3OR16-10A0A075B7F0 116 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms