RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 GRPRP30550 384 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 SDHAP31040 664 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
SNCA-204ENST00000394989 CTXN1P60606 82 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 LGALS3BPQ08380 585 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 SYT9Q86SS6 491 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 SNX33Q8WV41 574 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 THAP4Q8WY91 577 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 CDX2Q99626 313 aaPredicted RBP12.67□□□□□ -0.38
SNCA-204ENST00000394989 ALG12Q9BV10 488 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 FSCN3Q9NQT6 498 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 ZNF224Q9NZL3 707 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 RASD1Q9Y272 281 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 ALG5Q9Y673 324 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 U3KQA8 63 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 FAM240BA0A1B0GVZ2 78 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 PSMD9O00233 223 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 CAPZA2P47755 286 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 IL10RAQ13651 578 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 MESTQ5EB52 335 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 POMZP3Q6PJE2 187 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 C16orf47Q6ZP98 133 aaPredicted RBP12.67□□□□□ -0.38
SNCA-204ENST00000394989 Q7L0L9 218 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 KANSL1Q7Z3B3 1105 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 ZNF511Q8NB15 262 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 ACOT12Q8WYK0 555 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 TSPAN32Q96QS1 320 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 PDCD1LG2Q9BQ51 273 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 C1QTNF6Q9BXI9 259 aa12.67□□□□□ -0.38
SNCA-204ENST00000394989 A0A1W2PQD3 144 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 KHNYNO15037 678 aaKnown RBP12.66□□□□□ -0.38
SNCA-204ENST00000394989 EIF4EP06730 217 aaKnown RBP12.66□□□□□ -0.38
SNCA-204ENST00000394989 APEHP13798 732 aaKnown RBP12.66□□□□□ -0.38
SNCA-204ENST00000394989 ENPP1P22413 925 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 EVI2BP34910 448 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 PSMB10P40306 273 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 ZNF684Q5T5D7 378 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 HLA-DQA1Q5Y7H0 255 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 GUSBP11Q6P575 273 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 TRILQ7L0X0 811 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 TPRA1Q86W33 373 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 TEX19Q8NA77 164 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 UBL7Q96S82 380 aaPredicted RBP12.66□□□□□ -0.38
SNCA-204ENST00000394989 C12orf10Q9HB07 376 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 NPAP1Q9NZP6 1156 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 PCDHGB7Q9Y5F8 929 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 A0A087WV48 116 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 H7C1C5 153 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 TXNDC12O95881 172 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 PAHP00439 452 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 LCN1P31025 176 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 SLC6A8P48029 635 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
SNCA-204ENST00000394989 INPP1P49441 399 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 LCN6P62502 163 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 RHBDD2Q6NTF9 364 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 TMEM71Q6P5X7 295 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 SLC29A4Q7RTT9 530 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 C19orf18Q8NEA5 215 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 PLPP5Q8NEB5 264 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 OR4M2Q8NGB6 313 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 STT3BQ8TCJ2 826 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 KLHDC2Q9Y2U9 406 aa12.66□□□□□ -0.38
SNCA-204ENST00000394989 A0A1W2PQM1 296 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 LEUTXA8MZ59 168 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 FADS1O60427 444 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 ZNF354AO60765 605 aaPredicted RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 SLC19A2O60779 497 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 ITPKBP27987 946 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 GBX2P52951 348 aaPredicted RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 MRPL28Q13084 256 aaKnown RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 YOD1Q5VVQ6 348 aaPredicted RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 KCNJ15Q99712 375 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 TRBV2A0A0J9YWF9 115 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 PTBP1P26599 531 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNCA-204ENST00000394989 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 SSTR2P30874 369 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 SLC25A1P53007 311 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 PNLIPRP2P54317 469 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 ZNF57Q68EA5 555 aaPredicted RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 RPL22L1Q6P5R6 122 aaKnown RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 NUP54Q7Z3B4 507 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 RDH10Q8IZV5 341 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 RPS4Y2Q8TD47 263 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 OR14A2Q96R54 314 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 PTDSS2Q9BVG9 487 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 TBL1XR1Q9BZK7 514 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 TGIF2Q9GZN2 237 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 ASCC3Q8N3C0 2202 aaKnown RBP12.65□□□□□ -0.38
SNCA-204ENST00000394989 PI4KAP42356 2102 aa12.65□□□□□ -0.38
SNCA-204ENST00000394989 BGLAPP02818 100 aa12.65□□□□□ -0.39
SNCA-204ENST00000394989 TFPIP10646 304 aa12.65□□□□□ -0.39
SNCA-204ENST00000394989 ERP29P30040 261 aaKnown RBP12.65□□□□□ -0.39
SNCA-204ENST00000394989 GZMKP49863 264 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms