RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SNX32Q86XE0 403 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 KRT73Q86Y46 540 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 C20orf196Q8IYI0 205 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 SVOPLQ8N434 492 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 LINC01356Q8N9X3 169 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 UBASH3BQ8TF42 649 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 CKAP2Q8WWK9 683 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 MAL2Q969L2 176 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 SLC47A1Q96FL8 570 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 OR52B2Q96RD2 323 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 EPYCQ99645 322 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 SOX7Q9BT81 388 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 RSPO3Q9BXY4 272 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 NOX3Q9HBY0 568 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 TESQ9UGI8 421 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 CMAHPQ9Y471 501 aa15.11■□□□□ 0.01
SNRPA1-202ENST00000394082 A0A087WUJ7 227 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 MS4A18H0YCH9 400 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 ARAFP10398 606 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 PCMT1P22061 227 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 HTR2AP28223 471 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 ADRM1Q16186 407 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 MS4A18Q3C1V0 323 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 SWT1Q5T5J6 900 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 REEP3Q6NUK4 255 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 IL17RELQ6ZVW7 336 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 UEVLDQ8IX04 471 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 ZNF75AQ96N20 296 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 MS4A5Q9H3V2 200 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 DYNLRB1Q9NP97 96 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 FBXL3Q9UKT7 428 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 SPEF1Q9Y4P9 236 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 NOX1Q9Y5S8 564 aa15.1■□□□□ 0.01
SNRPA1-202ENST00000394082 LRP5LA4QPB2 252 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 PRORSD1PA6NEY8 169 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 SYNGR3O43761 229 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 ZNF35P13682 527 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 ZNF14P17017 642 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 APEX1P27695 318 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 GLRXP35754 106 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 CDH15P55291 814 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 NPRL3Q12980 569 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 SNTB2Q13425 540 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 GSG1Q2KHT4 349 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 SLC2A7Q6PXP3 512 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 EPGNQ6UW88 154 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 MRPL24Q96A35 216 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 TMEM43Q9BTV4 400 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 TMEM38AQ9H6F2 299 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 B3GAT2Q9NPZ5 323 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 MRPL39Q9NYK5 338 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 NKIRAS1Q9NYS0 192 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 SLC25A37Q9NYZ2 338 aa15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 TMEFF2Q9UIK5 374 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-202ENST00000394082 A0A0B4J2E0 115 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 A0A1B0GX12 115 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 TGDSO95455 350 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 DVL1P1P54792 670 aaPredicted RBP15.08■□□□□ 0
SNRPA1-202ENST00000394082 STX1BP61266 288 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 CDK6Q00534 326 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 PHYHD1Q5SRE7 291 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 GCNT6Q5T4J0 391 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 REP15Q6BDI9 236 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 BLOC1S3Q6QNY0 202 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 PXKQ7Z7A4 578 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 CDK20Q8IZL9 346 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 ZCCHC24Q8N2G6 241 aaKnown RBP15.08■□□□□ 0
SNRPA1-202ENST00000394082 MGARPQ8TDB4 240 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 ASPNQ9BXN1 380 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 TMEM27Q9HBJ8 222 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 SELENONQ9NZV5 590 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 CORO2BQ9UQ03 480 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 USH1CQ9Y6N9 552 aa15.08■□□□□ 0
SNRPA1-202ENST00000394082 M0R233 179 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 M0R3G1 203 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 TCF21O43680 179 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 SERPINB7O75635 380 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 HPRP00739 348 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 MT-ATP6P00846 226 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 BGLAPP02818 100 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 C8BP07358 591 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 ADRA2AP08913 450 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 IFNGR1P15260 489 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 NQO1P15559 274 aaKnown RBP15.07■□□□□ 0
SNRPA1-202ENST00000394082 GPX2P18283 190 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 CAPZA2P47755 286 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 NCALDP61601 193 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 MRPS11P82912 194 aaKnown RBP15.07■□□□□ 0
SNRPA1-202ENST00000394082 PUDPQ08623 228 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 KRT80Q6KB66 452 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 COMTD1Q86VU5 262 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 MSRB3Q8IXL7 192 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 NFKBIDQ8NI38 313 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 ZNF607Q96SK3 696 aa15.07■□□□□ 0
SNRPA1-202ENST00000394082 TRBV5-3A0A0A0MS03 114 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 SH3PXD2BA1X283 911 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 B4DSR2 109 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 TPST1O60507 370 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 FMO6PO60774 539 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 ENTPD5O75356 428 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms