RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 C1orf189Q5VU69 101 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 RABEPKQ7Z6M1 372 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 TMEM17Q86X19 198 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 SERPINA12Q8IW75 414 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 OR56A1Q8NGH5 318 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 OR5M9Q8NGP3 310 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 ZG16BQ96DA0 208 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 OR7D2Q96RA2 312 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 WFDC6Q9BQY6 131 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 ENKD1Q9H0I2 346 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 PPP4R1LQ9P1A2 415 aa17.36■□□□□ 0.37
CCDC50-202ENST00000392456 LNP1A1A4G5 178 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 SLC28A2O43868 658 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 MBP02144 154 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 FABP3P05413 133 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 RBP2P50120 134 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 EFNA3P52797 238 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 ZNF511Q8NB15 262 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 OR10H5Q8NGA6 315 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 TRMT10AQ8TBZ6 339 aaKnown RBP17.35■□□□□ 0.37
CCDC50-202ENST00000392456 SLC35A4Q96G79 324 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 ADAP2Q9NPF8 381 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 RXFP3Q9NSD7 469 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 VSX1Q9NZR4 365 aaPredicted RBP17.35■□□□□ 0.37
CCDC50-202ENST00000392456 ANGPT4Q9Y264 503 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 METTL21EPA6NDL7 271 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 TIAF1O95411 115 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 ALDOBP05062 364 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 AVPR1BP47901 424 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 ST3GAL2Q16842 350 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 TMEM91Q6ZNR0 172 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 ZNF605Q86T29 641 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 LHFPL3Q86UP9 236 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 COMTD1Q86VU5 262 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 SVBPQ8N300 66 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 B3GNT7Q8NFL0 401 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 METTL17Q9H7H0 456 aaPredicted RBP17.35■□□□□ 0.37
CCDC50-202ENST00000392456 NTMQ9P121 344 aa17.35■□□□□ 0.37
CCDC50-202ENST00000392456 TMEM200CA6NKL6 621 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 C5orf58C9J3I9 102 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 NR2F1P10589 423 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 NR2C1P13056 603 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 EVX1P49640 407 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 SELENOPP49908 381 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 ITGA1P56199 1179 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 MFSD12Q6NUT3 480 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 SLC38A9Q8NBW4 561 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 GPR32P1Q8NGA4 272 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 SPPL2AQ8TCT8 520 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 STK35Q8TDR2 534 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 ZNF226Q9NYT6 803 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 PCDHB10Q9UN67 800 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 ADAMTS20P59510 1910 aa17.34■□□□□ 0.37
CCDC50-202ENST00000392456 ZIC2O95409 532 aaPredicted RBP17.33■□□□□ 0.37
CCDC50-202ENST00000392456 SLC34A2O95436 690 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 MST1P26927 711 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 G0S2P27469 103 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 DUSP8Q13202 625 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 CDNFQ49AH0 187 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 PLBD1Q6P4A8 553 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 GPR135Q8IZ08 494 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 OR4D9Q8NGE8 314 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 TMEM163Q8TC26 289 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 AP3S1Q92572 193 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 CCDC74BQ96LY2 380 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 P2RX2Q9UBL9 471 aa17.33■□□□□ 0.37
CCDC50-202ENST00000392456 MARCH11A6NNE9 402 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 H0YIG0 161 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 CTNSO60931 367 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 GABRA1P14867 456 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 RAB4AP20338 218 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 KHKP50053 298 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 FABP9Q0Z7S8 132 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 LBHQ53QV2 105 aaPredicted RBP17.33■□□□□ 0.36
CCDC50-202ENST00000392456 THEM4Q5T1C6 240 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 ZNF730Q6ZMV8 503 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 FGD2Q7Z6J4 655 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 KMT5CQ86Y97 462 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 SPAG16Q8N0X2 631 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 POMGNT2Q8NAT1 580 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 NAT6Q93015 286 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 MOAP1Q96BY2 351 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 CTHRC1Q96CG8 243 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 MS4A4EQ96PG1 132 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 EDEM2Q9BV94 578 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 GGACTQ9BVM4 153 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 RIMS4Q9H426 269 aaPredicted RBP17.33■□□□□ 0.36
CCDC50-202ENST00000392456 EXOSC3Q9NQT5 275 aaKnown RBP17.33■□□□□ 0.36
CCDC50-202ENST00000392456 PRTFDC1Q9NRG1 225 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 COMMD3Q9UBI1 195 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 SERTAD3Q9UJW9 196 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 C19orf53Q9UNZ5 99 aaPredicted RBP17.33■□□□□ 0.36
CCDC50-202ENST00000392456 CHST2Q9Y4C5 530 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 NUBP2Q9Y5Y2 271 aa17.33■□□□□ 0.36
CCDC50-202ENST00000392456 FCMRO60667 390 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 SEMA7AO75326 666 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 RP2O75695 350 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 SLC35E2P0CK97 266 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 GUCA2BQ16661 112 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 PLA2G2CQ5R387 149 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms