RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ZNF670-ZNF695F2Z2N8 137 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 XKRYO14609 159 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 SLC30A4O14863 429 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 TRIM3O75382 744 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 TFPIP10646 304 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 LIFP15018 202 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 RPS25P62851 125 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 PUDPQ08623 228 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 ATP1A4Q13733 1029 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 B3GNTL1Q67FW5 361 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 CD200R1LQ6Q8B3 271 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 SLC35F2Q8IXU6 374 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 GTPBP8Q8N3Z3 284 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 ATP6V1C2Q8NEY4 427 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR1J4Q8NGS1 313 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 PSMF1Q92530 271 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 NXPE2Q96DL1 559 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 TRMT61AQ96FX7 289 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 IP6K3Q96PC2 410 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 SIAEQ9HAT2 523 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 CHST11Q9NPF2 352 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 TRIM36Q9NQ86 728 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 MRPS18BQ9Y676 258 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 A3GALT2U3KPV4 340 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 A0A1W2PRG6 482 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 MS4A18H0YCH9 400 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 H3BML4 177 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ATP6V1G1O75348 118 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ACVR1BP36896 505 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ENTPD1P49961 510 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 DSCR4P56555 118 aaPredicted RBP10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ACTA2P62736 377 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ACTG2P63267 376 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 GABREP78334 506 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 MYBPHQ13203 477 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 MS4A18Q3C1V0 323 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 EEF1A1P5Q5VTE0 462 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZBTB46Q86UZ6 589 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZFP41Q8N8Y5 198 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF248Q8NDW4 579 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 NKD1Q969G9 470 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 COQ7Q99807 217 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 LRFN3Q9BTN0 628 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 NXF2Q9GZY0 626 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 TXNL4BQ9NX01 149 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZMIZ1Q9ULJ6 1067 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 B3GALT5Q9Y2C3 310 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 FREM2Q5SZK8 3169 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 AHCTF1Q8WYP5 2266 aa10.3□□□□□ -0.76
SMARCAL1-203ENST00000392128 PNMA8CA0A1B0GUJ8 204 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 PRSS37A4D1T9 235 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 METTL15A6NJ78 407 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 ARHGEF9O43307 516 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 SELENOFO60613 162 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 PLGP00747 810 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 CELP19835 753 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 GALP22466 123 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 DPP4P27487 766 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 FGF9P31371 208 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 PYCR1P32322 319 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 NAA10P41227 235 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 TAS2R43P59537 309 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 HSF2Q03933 536 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF404Q494X3 552 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 TIGD3Q6B0B8 471 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 VASNQ6EMK4 673 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 SSX6Q7RTT6 188 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 MDGA2Q7Z553 956 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR6V1Q8N148 313 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 SYS1Q8N2H4 156 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 ADPRHL1Q8NDY3 354 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 SMAP2Q8WU79 429 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 TMEM203Q969S6 136 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 THOC3Q96J01 351 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 C4orf36Q96KX1 117 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 TSSK2Q96PF2 358 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 SYT4Q9H2B2 425 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 MMP27Q9H306 513 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 SACM1LQ9NTJ5 587 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 VSX1Q9NZR4 365 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 TRDV1A0A1B0GX56 115 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 A0A1W2PNV4 684 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 CDRT15L2A8MXV6 281 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 H7C1C5 153 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 DCTN6O00399 190 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 CBR3O75828 277 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 P04436 131 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 CD53P19397 219 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 BMXP51813 675 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 LCN6P62502 163 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 TLE3Q04726 772 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF829Q3KNS6 432 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 GLYR1Q49A26 553 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 CDONQ4KMG0 1287 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 SLC16A9Q7RTY1 509 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 BEST3Q8N1M1 668 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR6Q1Q8NGQ2 317 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 MCFD2Q8NI22 146 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms