RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 FAHD1Q6P587 224 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 CBLL1Q75N03 491 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 CPOQ8IVL8 374 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 C9orf40Q8IXQ3 194 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF440Q8IYI8 595 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF671Q8TAW3 534 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 DIRAS2Q96HU8 199 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 ASB6Q9NWX5 421 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 CMAHPQ9Y471 501 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 MYLKQ15746 1914 aa9.38□□□□□ -0.91
COL6A3-205ENST00000392004 A0A096LPE4 126 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 A0A1W2PPZ6 126 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 FABP12A6NFH5 140 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 TSC22D2O75157 780 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 CD96P40200 585 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ETV6P41212 452 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 SLC6A8P48029 635 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 PLP2Q04941 152 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 IQCCQ4KMZ1 466 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF628Q5EBL2 1059 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 TRIQKQ629K1 86 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 TMPPEQ6ZT21 453 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 CCDC71Q8IV32 467 aaPredicted RBP9.37□□□□□ -0.91
COL6A3-205ENST00000392004 LRRC17Q8N6Y2 441 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF283Q8N7M2 679 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF676Q8N7Q3 588 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 YIPF7Q8N8F6 280 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ANGPTL6Q8NI99 470 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 SNAPC3Q92966 411 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 FYTTD1Q96QD9 318 aaKnown RBP9.37□□□□□ -0.91
COL6A3-205ENST00000392004 FN3KQ9H479 309 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 GNG8Q9UK08 70 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 TBC1D24Q9ULP9 559 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 NEUROG3Q9Y4Z2 214 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 TRBV5-3A0A0A0MS03 114 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 C21orf140B9A014 251 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 HMGN1P05114 100 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 UQCRC1P31930 480 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 CD226Q15762 336 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 MRM1Q6IN84 353 aaKnown RBP9.37□□□□□ -0.91
COL6A3-205ENST00000392004 MZT2BQ6NZ67 158 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 AAED1Q7RTV5 226 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 FAM109AQ8N4B1 249 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF417Q8TAU3 575 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF587Q96SQ5 575 aaPredicted RBP9.37□□□□□ -0.91
COL6A3-205ENST00000392004 TM9SF2Q99805 663 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 PIGQQ9BRB3 760 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 SIRT5Q9NXA8 310 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ASIC5Q9NY37 505 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 MED13Q9UHV7 2174 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 TCRBV16S1A1N1A0A5B0 115 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 FAM90A27PA6NNH2 459 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 OR2T1O43869 369 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ERGP11308 486 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 PRKACBP22694 351 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 SLC37A1P57057 533 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 FOXK1P85037 733 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 C1QL3Q5VWW1 255 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 XKRXQ6PP77 449 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 PTOV1Q86YD1 416 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 OR5H6Q8NGV6 325 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 SLC7A13Q8TCU3 470 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 RNFT2Q96EX2 444 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 MRPL48Q96GC5 212 aaKnown RBP9.37□□□□□ -0.91
COL6A3-205ENST00000392004 GABARAPL3Q9BY60 117 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 OR52D1Q9H346 318 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 SIRT3Q9NTG7 399 aaPredicted RBP9.37□□□□□ -0.91
COL6A3-205ENST00000392004 GPATCH2Q9NW75 528 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 ADAM18Q9Y3Q7 739 aa9.37□□□□□ -0.91
COL6A3-205ENST00000392004 FAAHO00519 579 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 MPZL2O60487 215 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 OR3A3P47888 321 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 BIDP55957 195 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 IL10RAQ13651 578 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 DDI2Q5TDH0 399 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 KLHL17Q6TDP4 642 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 SLC35D2Q76EJ3 337 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 GDF7Q7Z4P5 450 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 SPERTQ8NA61 448 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 GNPDA2Q8TDQ7 276 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 DEDD2Q8WXF8 326 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 PPP1R14AQ96A00 147 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 ZNF845Q96IR2 970 aaPredicted RBP9.36□□□□□ -0.91
COL6A3-205ENST00000392004 SPATA9Q9BWV2 254 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 ULBP2Q9BZM5 246 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 AICDAQ9GZX7 198 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 COQ3Q9NZJ6 369 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 LAMP5Q9UJQ1 280 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 NOSIPQ9Y314 301 aaKnown RBP9.36□□□□□ -0.91
COL6A3-205ENST00000392004 LRRK2Q5S007 2527 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 PRR19A6NJB7 356 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 TPPPO94811 219 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 GASTP01350 101 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 GSTM3P21266 225 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 GZMMP51124 257 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 YIF1BQ5BJH7 314 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 LCN1P1Q5VSP4 162 aa9.36□□□□□ -0.91
COL6A3-205ENST00000392004 MAMSTRQ6ZN01 415 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms