RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 SCN3AQ9NY46 2000 aa11.96□□□□□ -0.5
PTPRN2-203ENST00000389418 FUOMA2VDF0 154 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 MEIS3P1A6NDR6 274 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 ARHGAP33O14559 1287 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 MBTPS2O43462 519 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 IFNA1P01562 189 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 CELA2BP08218 269 aaPredicted RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 HTR1FP30939 366 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 NKX2-5P52952 324 aaPredicted RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 ERVK-16P61578 105 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 GLYR1Q49A26 553 aaPredicted RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 ENTHD1Q8IYW4 607 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 ABHD5Q8WTS1 349 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 CNOT9Q92600 299 aaKnown RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 MUL1Q969V5 352 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 HYLS1Q96M11 299 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 PLAC1Q9HBJ0 212 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 NUBP2Q9Y5Y2 271 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF593O00488 134 aaPredicted RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 LGI1O95970 557 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 UQCRC1P31930 480 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 HLA-BQ31612 363 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF385BQ569K4 471 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 SLX4IPQ5VYV7 408 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 TMEM71Q6P5X7 295 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 NCCRP1Q6ZVX7 275 aaPredicted RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 H1FNTQ75WM6 255 aaPredicted RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 BRIX1Q8TDN6 353 aaKnown RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 C1QTNF6Q9BXI9 259 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 CDCP1Q9H5V8 836 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 CALHM2Q9HA72 323 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 DIMT1Q9UNQ2 313 aaKnown RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 KIAA1217Q5T5P2 1943 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 NOTCH2Q04721 2471 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 EEF1E1-BLOC1S5C9J1V9 151 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 IFNA2P01563 188 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 AKR1C4P17516 323 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 PRPH2P23942 346 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 TNFSF8P32971 234 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 FOXK2Q01167 660 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 C1orf140Q5VVS0 124 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 NIPAL3Q6P499 406 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 C22orf15Q8WYQ4 148 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 HINT2Q9BX68 163 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 DYNLRB1Q9NP97 96 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 TMEM9BQ9NQ34 198 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 FAIMQ9NVQ4 179 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 NOTOA8MTQ0 251 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF587BE7ETH6 402 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 SC5DO75845 299 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 SERPINE2P07093 398 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 SLC1A3P43003 542 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 CAV3P56539 151 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 DEFA5Q01523 94 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 MFAP5Q13361 173 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 IL10RAQ13651 578 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 CRMP1Q14194 572 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 DUSP5Q16690 384 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 PLCXD3Q63HM9 321 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 METTL9Q9H1A3 318 aa11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 WSB2Q9NYS7 404 aaPredicted RBP11.95□□□□□ -0.5
PTPRN2-203ENST00000389418 FAM230AA0A1W2PPH8 454 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 P2RX6O15547 441 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 FCMRO60667 390 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 IL7P13232 177 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 OR6Q1Q8NGQ2 317 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 OR13F1Q8NGS4 319 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 SDF2Q99470 211 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 SIAEQ9HAT2 523 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 A0A1B0GVG6 124 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF814B7Z6K7 855 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 TSPAN4O14817 238 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 HOXC4P09017 264 aaPredicted RBP11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 PLK5Q496M5 336 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 HBMQ6B0K9 141 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 WDR88Q6ZMY6 472 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 KANSL1Q7Z3B3 1105 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 DND1Q8IYX4 353 aaKnown RBP11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 ASCC1Q8N9N2 400 aaKnown RBP11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 OR11L1Q8NGX0 322 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 RHOXF1Q8NHV9 184 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 TMEM255BQ8WV15 326 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 SGCZQ96LD1 299 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 EMC6Q9BV81 110 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 GHRLQ9UBU3 117 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 POMT2Q9UKY4 750 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 SURF4O15260 269 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 HTR4Q13639 388 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 ACTBL2Q562R1 376 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF684Q5T5D7 378 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 DESI1Q6ICB0 168 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 YRDCQ86U90 279 aaKnown RBP11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 CARFQ8N187 725 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 OR2A1Q8NGT9 310 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms