RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 FAM199XQ6PEV8 388 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-201ENST00000388940 HIST3H2AQ7L7L0 130 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 CDH24Q86UP0 819 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 HIST1H2ACQ93077 130 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 TAAR8Q969N4 342 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 TSSK2Q96PF2 358 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 OR2M2Q96R28 347 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 NUDT9Q9BW91 350 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 MED28Q9H204 178 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 NUDT15Q9NV35 164 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 CLEC4AQ9UMR7 237 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 V9GY05 133 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 TRBV5-5A0A0J9YX44 114 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 TRABD2BA6NFA1 517 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 ACOD1A6NK06 481 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 HSPB2A8KAH6 182 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 ARHGEF9O43307 516 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 TSPAN2O60636 221 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 ICOSLGO75144 302 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 ALX3O95076 343 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 RENP00797 406 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 BGLAPP02818 100 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 M6PRP20645 277 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 GRPRP30550 384 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 RPL6Q02878 288 aaKnown RBP13.58□□□□□ -0.24
SCFD2-201ENST00000388940 TDGQ13569 410 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 EBPQ15125 230 aaKnown RBP13.58□□□□□ -0.24
SCFD2-201ENST00000388940 HSPB2Q16082 182 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 Q499Y3 187 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 BCL2L15Q5TBC7 163 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-201ENST00000388940 HYLS1Q96M11 299 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 CACNG6Q9BXT2 260 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 SRA1Q9HD15 236 aaKnown RBP13.58□□□□□ -0.24
SCFD2-201ENST00000388940 AKAP7Q9P0M2 348 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-201ENST00000388940 MRPS7Q9Y2R9 242 aaKnown RBP13.58□□□□□ -0.24
SCFD2-201ENST00000388940 RNF215Q9Y6U7 377 aa13.58□□□□□ -0.24
SCFD2-201ENST00000388940 GON4LQ3T8J9 2241 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 ALG1L2C9J202 215 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 DCTN6O00399 190 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 MBTPS2O43462 519 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 SULT1B1O43704 296 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 CDC40O60508 579 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCFD2-201ENST00000388940 SERPINI2O75830 405 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 ZNF432O94892 652 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 CALCBP10092 127 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 EGR3Q06889 387 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 SNAP47Q5SQN1 464 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 EEF1A1P5Q5VTE0 462 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 LIPNQ5VXI9 398 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 CD276Q5ZPR3 534 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 ESPNLQ6ZVH7 1005 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 EID2Q8N6I1 236 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 OR5AK2Q8NH90 309 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 KLHDC3Q9BQ90 382 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 PHF7Q9BWX1 381 aaPredicted RBP13.57□□□□□ -0.24
SCFD2-201ENST00000388940 RTN4RQ9BZR6 473 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 WDR76Q9H967 626 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 SEMA5BQ9P283 1151 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 KLHDC2Q9Y2U9 406 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 SZT2Q5T011 3432 aa13.57□□□□□ -0.24
SCFD2-201ENST00000388940 TRAV6A0A075B6T7 132 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 TRAV36DV7A0A075B6V5 113 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 PSMD9O00233 223 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 PHYHO14832 338 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 OR8G3PP0DMU2 310 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 STOMP27105 288 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 GIFP27352 417 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 IL12BP29460 328 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 HES5Q5TA89 166 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 BTN2A1Q7KYR7 527 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 OR6V1Q8N148 313 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 D2HGDHQ8N465 521 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 DAZLQ92904 295 aaKnown RBP13.56□□□□□ -0.24
SCFD2-201ENST00000388940 KLHL15Q96M94 604 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 ACTR6Q9GZN1 396 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 SLITRK2Q9H156 845 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 EMC7Q9NPA0 242 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 FRRS1LQ9P0K9 344 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 ZNF346Q9UL40 294 aaKnown RBP13.56□□□□□ -0.24
SCFD2-201ENST00000388940 TMEM14AQ9Y6G1 99 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 DNAH14Q0VDD8 3507 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 SPTBN5Q9NRC6 3674 aaKnown RBP13.56□□□□□ -0.24
SCFD2-201ENST00000388940 CEP192Q8TEP8 1941 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 IGHV1OR21-1A0A087WYE8 117 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 ARPC4-TTLL3A0A0A6YYG9 625 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 A6NL46 340 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 ZNF780AO75290 641 aaPredicted RBP13.56□□□□□ -0.24
SCFD2-201ENST00000388940 RAB40ALP0C0E4 278 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 ALOX5APP20292 161 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 CXCR1P25024 350 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 PNLIPRP2P54317 469 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 SNTB2Q13425 540 aaKnown RBP13.56□□□□□ -0.24
SCFD2-201ENST00000388940 SMAD4Q13485 552 aaKnown RBP13.56□□□□□ -0.24
SCFD2-201ENST00000388940 FCN2Q15485 313 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 HLA-DQA1Q5Y7H0 255 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 STAC2Q6ZMT1 411 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 C9orf40Q8IXQ3 194 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 PRR22Q8IZ63 422 aa13.56□□□□□ -0.24
SCFD2-201ENST00000388940 OR1L3Q8NH93 324 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms