RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 ERVK-25P63136 954 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 NUCB2P80303 420 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 CBX1P83916 185 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 SPIBQ01892 262 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 SF3A2Q15428 464 aaKnown RBP1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 CHRFAM7AQ494W8 412 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 SLC36A3Q495N2 470 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 BLOC1S2Q6QNY1 142 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 ZNF836Q6ZNA1 936 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 PGAP1Q75T13 922 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 CCDC50Q8IVM0 306 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 SLC35F2Q8IXU6 374 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 ZADH2Q8N4Q0 377 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 OR2T34Q8NGX1 318 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 FANK1Q8TC84 345 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 RLN3Q8WXF3 142 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 RNF2Q99496 336 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 ZNF2Q9BSG1 426 aaPredicted RBP1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 NAT9Q9BTE0 207 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 THUMPD2Q9BTF0 503 aaKnown RBP1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 CHAC1Q9BUX1 264 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 ING2Q9H160 280 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 GBA3Q9H227 469 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 RBKSQ9H477 322 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 CLMPQ9H6B4 373 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 RNF167Q9H6Y7 350 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 YY1AP1Q9H869 796 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 NHEJ1Q9H9Q4 299 aaPredicted RBP1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 NOX3Q9HBY0 568 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 FARSBQ9NSD9 589 aaKnown RBP1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 UFSP2Q9NUQ7 469 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 THUMPD1Q9NXG2 353 aaKnown RBP1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 SPATA7Q9P0W8 599 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 OR12D3Q9UGF7 316 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 PCYOX1Q9UHG3 505 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 LAMP5Q9UJQ1 280 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 MEMO1Q9Y316 297 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 KIF3AQ9Y496 699 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 PLXNB1O43157 2135 aa1.13□□□□□ -2.23
RNU6-541P-201ENST00000384709 BRCA1P38398 1863 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 LTBP4Q8N2S1 1624 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 CEMIPQ8WUJ3 1361 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RPAP1Q9BWH6 1393 aaPredicted RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 GPATCH8Q9UKJ3 1502 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 IGHV5-51A0A0C4DH38 117 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 TCRBV9S1A1TA0A576 114 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 PRSS37A4D1T9 235 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RBMY1BA6NDE4 496 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RBMY1EA6NEQ0 496 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 H3BNH8 94 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 K7EPI3 171 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 XKRYO14609 159 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 XPO1O14980 1071 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 B4GALT5O43286 388 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 FGF1P05230 155 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 CAPN1P07384 714 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 DCNP07585 359 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 IQCF3P0C7M6 154 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RBMY1DP0C7P1 496 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 GKN3PP0CG01 181 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 TSPY4P0CV99 314 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 TSPY10P0CW01 314 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RBMY1A1P0DJD3 496 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 NCF1P14598 390 aaPredicted RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RPL13AP40429 203 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 ACAA2P42765 397 aaKnown RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 UBE2AP49459 152 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 REG3AQ06141 175 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 SMARCB1Q12824 385 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 OR5I1Q13606 314 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 IGFBP7Q16270 282 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 PRSS8Q16651 343 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 DGUOKQ16854 277 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 TTLL9Q3SXZ7 439 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 TTC23Q5W5X9 447 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 TMEM225Q6GV28 225 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 DUX4L9Q6RFH8 374 aaPredicted RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 Q6ZN92 141 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 FAM92BQ6ZTR7 304 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 ZNF679Q8IYX0 411 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 MYOCDQ8IZQ8 938 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 STPG2Q8N412 459 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 OR52H1Q8NGJ2 320 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 DTNBP1Q96EV8 351 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 COQ2Q96H96 371 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 SENP8Q96LD8 212 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 NDFIP1Q9BT67 221 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RWDD1Q9H446 243 aaPredicted RBP1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 NIPAL2Q9H841 368 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 SIRT7Q9NRC8 400 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 SLC35D1Q9NTN3 355 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 EXD2Q9NVH0 621 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 KCNIP1Q9NZI2 227 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 RNF14Q9UBS8 474 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 NFASCO94856 1347 aa1.12□□□□□ -2.23
RNU6-541P-201ENST00000384709 TRAV40A0A0B4J280 105 aa1.11□□□□□ -2.23
RNU6-541P-201ENST00000384709 OR5B21A6NL26 309 aa1.11□□□□□ -2.23
RNU6-541P-201ENST00000384709 ARPC3O15145 178 aa1.11□□□□□ -2.23
RNU6-541P-201ENST00000384709 RCBTB2O95199 551 aa1.11□□□□□ -2.23
RNU6-541P-201ENST00000384709 IGHV2-5P01817 119 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms